Gene Acel_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1590 
SymbolleuD 
ID4484643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1788829 
End bp1789422 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID639730374 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_873348 
Protein GI117928797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.494308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCT TCACCACGCA CACCGGTCGC GCCGTACCGC TGCGGCGCAG CAACGTCGAC 
ACCGACCAAA TCATCCCCGC GGTGTATCTC AAGCGGGTGA GTCGTACCGG CTTCGCTGAC
GGTCTGTTCG CCGCCTGGCG GCAGGATCCC GGGTTCGTGC TCAACCGTCC GGAGTTCGCC
GGCGCCGACA TTCTGGTCGC CGGTCCGGAC TTTGGCACGG GTTCCTCGCG CGAACACGCC
GTGTGGGCCT TGCAGGACTA CGGCTTCCGG GTCGTCATCT CGCCGCGCTT CGGCGACATC
TTCCGCAACA ATGCCCTCAA GGGCGGCCTG CTCGCCGTCG TCCTGCCCGA GTCTGACGTC
GAAGCGCTCT GGGACGTGGT AGAAAGCGAT CCCGCAACTC CGGTGACCGT GGACCTCGTC
ACCCGCGAGG TGCGGTACGC CGACGTGGTG CGCGGTTTCG ACATCGACGA CTACACCCGT
TGGCGTCTGA TGGAGGGACT CGATGACATC GGCTTGACGC TGCGCCATGC CGATGCCATC
GACGCTTTCG AGGCTCGCCG ACCTGCGTGG AAGCCGACGA CCCGGGCCAG TTGA
 
Protein sequence
MEPFTTHTGR AVPLRRSNVD TDQIIPAVYL KRVSRTGFAD GLFAAWRQDP GFVLNRPEFA 
GADILVAGPD FGTGSSREHA VWALQDYGFR VVISPRFGDI FRNNALKGGL LAVVLPESDV
EALWDVVESD PATPVTVDLV TREVRYADVV RGFDIDDYTR WRLMEGLDDI GLTLRHADAI
DAFEARRPAW KPTTRAS