Gene Acel_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1580 
Symbol 
ID4485480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1778884 
End bp1781109 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content69% 
IMG OID639730364 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_873338 
Protein GI117928787 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.12328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCC GCGACGAACT GCGCCTCCCG CTCCGGCAGG TCCTCGGCGG CCGGACCGCT 
GCGGCCCTCG CGCGGCTCGG GCTCGACACC GTCGGTGACC TGCTCACCTA CTTTCCACGC
CGGTACCACC AGCGCGGCGA ACTGACGCCG CTCCGGGAAT TGCGCGACGA CGAACACGCC
ACGATATTCG CCGAAATTCT GTCCGTGCGG GAACGGCGGC TGAGCGGCCA TCGGCGGATG
TACGACGTCG TCGTCACGGA CGGCGACGAG AAGCTGAAGC TGCGATTCTT CAATCTCACC
AATTGGCAGT TGGAAAAACT CGCCGTCGGC GGCCGCGGCT TTTTCTCCGG TAAAGTCACC
CGGTTCAAAG GGGAGCGGCA AATCGTTCAC CCCGAGATGG AGTTCGTGGA CCCGGACACG
GATCCCGCTT TCGCGAGCGC GATCATCCCG GTGTACCCGG CTGCGGAGCA CATATCGAGC
GGCATGATTT GGCGGGCGGT CCGCCATGTG CTGGACACCC TCGACATCAG CGAGGATCCG
CTGCCGGCCG ACATCCGCCG TCGCCACAAT CTGGTCACGC TGCGCCGCGC CTTGGAGAAC
ATGCACCGGC CGGCTGACCT GGCCGACGTT GCGACGGGAC GGCGCCGTTT TACCTTCCAG
GAGGCATTTG TCTTCCAGCT GGCGCTCGGT TTGCGCCGGC GGATGATGCA GGCGGAGCAG
GCAGTGCCGC GGCCGCGGCG TCGCGGGGGC TTGCTCGATG CCTTTGACGC CGCGCTTCCC
TTCGCCTTGA CCGAGGGCCA GCGACGCGCG GGTGCTGACA TCGAAGCCGA TTTGGCTGCG
CCGCATCCAA TGCACCGGCT GCTGCACGGT GAGGTGGGAT CCGGCAAGAC GCTCGTGGCG
TTGCGGGCCA TGCTGACGGT GGTGGATGCC GGCGGGCAGG CGGCGCTGCT TGCGCCCACG
GAAGTCCTTG CCATGCAGCA CTACCAGACC ATCACCCGCC TGCTCGGCTC GCTGGCCCTT
GCCGGTCAGC TCGGTGGCGC CGAGACGGCG ACGCGGGTAG CGTTGATCAC CGGTTCCGTC
ACCGGCGGTG CGCGGCGGGA GCTGCTCGAC GCGATTGCGG CCGGGGAGGT TGGGATTGTC
GTCGGAACCC ACGCCCTCCT TTACGACACT GTGCGGTTCG CCGACCTCGG ATTGGTGGTG
GTCGACGAGC AGCATCGGTT CGGCGTCGAG CAGCGCGCCG CCCTGCGAAC GAAGGGTTCC
GATGGAACCG TGCCGCACGT GCTGGTCATG ACGGCCACGC CGATTCCGCG GACGGTCGCG
CTCACCGTCT ACGGTGATCT CGACATCTCG GTGCTCCGGG AACGCCCGTC CGGCGACCCG
AAGGTTGACA CGTTCGTCGT TCCACTGAGT GAGAAGCCGG CCTGGGCGGA GCGGGTCTGG
GCCCGGGTCC GCGAAGAGGC GGCGGCCGGC CGCCAGGTCT ACGTGATCTG CCCGCGGATC
AGCACAGGCG AGGACGACAC CGGTGACGAG AGCGACGACA TCGTCGTCCC GGCCGAACCT
GCCGACAACG GCAGGCTGCC CGGGCTTTCC GGCGCCGGCC GGCCGCCTCG GGTCCGCCGC
GCGGCCGCGG TCGACGAGGT GGCGGCGACC CTGCGGGACG GACCGCTCCG CGGACTGCGG
ATCGGGACCC TGCACGGGCG GATGGACGCA GCCGCGAAGG ACGCCGTGCT GGCGGACTTC
TCGGCCGGCC GTCTCGACGT GCTCGTTGCG ACGACGGTTG TTGAGGTCGG CGTCGACGTG
CCCAACGCGT CCATGATGGT GATTCTGGAC GCCGACCGAT TCGGCGTCTC CCAACTGCAC
CAGCTGCGTG GGCGGATCGG ACGGGCCGGG CAGCGCGCGG TGTGTCTGCT CGTTACCGAG
GCGCCGGCCG ACACCGCGGC GTATGCACGG CTGACCGGCG TTGCCGCAAC CTGCGACGGC
TTTCGCCTTG CTGAGCTGGA CCTCGAGCAG CGCGGCGAGG GTACGGTTCG GGATGTCGTC
CAGCACGGTC GGAGCGATTT CCGGTTCCTC TCCCTGCTTC GGCACCGGGA CGTCATCGAA
ACCGCCCGGG CCGAGGCCGA GCAGCTGATC GCAGCGGATC CTGAGCTCAC CCAGCATCCG
GGTCTCGCGA ACGCCGTCGC GCCGTTGTTG GCCGACGACC GACTGCGGTA CGTCGACATC
GCGTGA
 
Protein sequence
MAVRDELRLP LRQVLGGRTA AALARLGLDT VGDLLTYFPR RYHQRGELTP LRELRDDEHA 
TIFAEILSVR ERRLSGHRRM YDVVVTDGDE KLKLRFFNLT NWQLEKLAVG GRGFFSGKVT
RFKGERQIVH PEMEFVDPDT DPAFASAIIP VYPAAEHISS GMIWRAVRHV LDTLDISEDP
LPADIRRRHN LVTLRRALEN MHRPADLADV ATGRRRFTFQ EAFVFQLALG LRRRMMQAEQ
AVPRPRRRGG LLDAFDAALP FALTEGQRRA GADIEADLAA PHPMHRLLHG EVGSGKTLVA
LRAMLTVVDA GGQAALLAPT EVLAMQHYQT ITRLLGSLAL AGQLGGAETA TRVALITGSV
TGGARRELLD AIAAGEVGIV VGTHALLYDT VRFADLGLVV VDEQHRFGVE QRAALRTKGS
DGTVPHVLVM TATPIPRTVA LTVYGDLDIS VLRERPSGDP KVDTFVVPLS EKPAWAERVW
ARVREEAAAG RQVYVICPRI STGEDDTGDE SDDIVVPAEP ADNGRLPGLS GAGRPPRVRR
AAAVDEVAAT LRDGPLRGLR IGTLHGRMDA AAKDAVLADF SAGRLDVLVA TTVVEVGVDV
PNASMMVILD ADRFGVSQLH QLRGRIGRAG QRAVCLLVTE APADTAAYAR LTGVAATCDG
FRLAELDLEQ RGEGTVRDVV QHGRSDFRFL SLLRHRDVIE TARAEAEQLI AADPELTQHP
GLANAVAPLL ADDRLRYVDI A