Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1546 |
Symbol | |
ID | 4485219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1744628 |
End bp | 1745497 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639730330 |
Product | RNA polymerase sigma factor WhiG |
Protein accession | YP_873304 |
Protein GI | 117928753 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.251252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGACAGA ACATTGACGC GGTCACCGAG CAGGCAGGAC CGGATGAGGT GACGGCAGGA CTCGGCGAAA CCCCACCGGA GGAGGTGACC TCCCGCGAGG ACGCCGAGGC GGCGCTCCGT GACCTGTGGC GGCGGTTCAA GGAGACCGGC GACCCCGAGC TGCGTGAGCG TCTCATCCTG CATTACTCGC CCCTGGTCAA GTACGTCGCC GGCCGGGTCG GTGTCGGCCT GCCGCCCAAT ATCGAGCAGG CCGACTTGGT CTCCTATGGG ATCTTCGGTC TCATTGACGC GATCGAAAAG TTCGATCTCG ACCGCGCCAT CAAGTTCGAG ACGTATGCCA TCAATCGCAT TAAGGGCGCG ATTATCGATG AATTGCGGGC CATCGACTGG ATTCCCCGCT CGGTCCGCTA TAAGGCCCGT GAAGTCGAGA AAGCGTACGC CGCACTCGAA CACAAGCTGC ACCGGACGCC TACCGAGGCG GAGGTTGCTG CAGAACTCGG CATTAGTCTC GATGAACTGC ACGCCATTTT CAGCCAGGTA TCCTTCGTCA ATGTGATTGC GCTTGATGAA TTGCTCAACG TCGGCGGGGA CCGCGGCGAT CGGCTCTCTC TGGTCGACAC GCTCGAAGAC ACCAAAGCTG AGGATCCCGT CGAAGCATTC GAGACCGAGG AGACGAAGTA CCTTCTGTCG CGCGCGATCA ACGCTCTTCC TGAGCGCGAG AAAATCGTTA TCACGTTGTA TTACTACGAA GGGCTGACGC TTGCGGAAAT CGGCCAGGTT CTCGGCGTCA CCGAGAGCCG GATCTGTCAA ATGCACACCA AGGCGGTGCT GCAGCTGCGG GCGAAATTGG CGGAGCAGAC CGGGGGGTAG
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Protein sequence | MGQNIDAVTE QAGPDEVTAG LGETPPEEVT SREDAEAALR DLWRRFKETG DPELRERLIL HYSPLVKYVA GRVGVGLPPN IEQADLVSYG IFGLIDAIEK FDLDRAIKFE TYAINRIKGA IIDELRAIDW IPRSVRYKAR EVEKAYAALE HKLHRTPTEA EVAAELGISL DELHAIFSQV SFVNVIALDE LLNVGGDRGD RLSLVDTLED TKAEDPVEAF ETEETKYLLS RAINALPERE KIVITLYYYE GLTLAEIGQV LGVTESRICQ MHTKAVLQLR AKLAEQTGG
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