Gene Acel_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1533 
Symbol 
ID4486136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1730911 
End bp1731633 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID639730317 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_873291 
Protein GI117928740 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCG AGGAACCATC AGCGGCAGCA ATCGTGCTCG CCGGCGGTGA CGGTCGGCGT 
TTCGGTGCCG CGATGAACAA GGTTTTCCTT CCCCTCGCCC ACCGTCCGGT AATTTCCTGG
TCACTGGAAG CATTGAGCCG CGTGCCCAAT GTTCGCCATG TCATCGTGAC AGTACGCGCG
CATGAACGCG GCCTTGCCCG CGCCATGCTC GACCGTGATT TCCCGAACCT TGATGTCCTC
CTTGTTGATG GCGGGGAGAG CCGACACCAC TCGGAGTACA ACGCATTACG CGCGCTCGAG
AACCGCGGAA TCGACGTCGA CGTCATTGCC ATCCACGACG GCGCTCGACC GTTCATCTCC
GCGGAACTGG TGCATCAGCT CATCACGGTT GCCCATATGG TGGGGGGCGC GGTTCCCGCC
TTACCGGCGC TGGATTTGGC GCGTATCGAG GGGAACGAAG TGCTGGAGAC GCTCAGCACG
GGCGGCACGC TGGTCCGCAT GCAAACACCT CAGGCGTTTC AAGCCGAACA GGTGATAGCG
GCGTATCATG CGGCCGCGCG CCGGGGTTTC ATCGGCACGG ACACCGCGTC GTGCGTGGAG
AATTTCACCG ATACGGTCAT CCAAACGATC CCCGGCGACA CCCGGAATAT CAAGGTGACC
TACCCGCAGG ATCTGACTGC GGCCGAACAC ATTCTCGCCG CCGCGCATCA CCCCGGCGCG
TGA
 
Protein sequence
MVSEEPSAAA IVLAGGDGRR FGAAMNKVFL PLAHRPVISW SLEALSRVPN VRHVIVTVRA 
HERGLARAML DRDFPNLDVL LVDGGESRHH SEYNALRALE NRGIDVDVIA IHDGARPFIS
AELVHQLITV AHMVGGAVPA LPALDLARIE GNEVLETLST GGTLVRMQTP QAFQAEQVIA
AYHAAARRGF IGTDTASCVE NFTDTVIQTI PGDTRNIKVT YPQDLTAAEH ILAAAHHPGA