Gene Acel_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1471 
Symbol 
ID4484916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1649546 
End bp1650808 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content66% 
IMG OID639730255 
Productmajor facilitator transporter 
Protein accessionYP_873229 
Protein GI117928678 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.981301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACC GAGACCGCGT GACGGCGGCA CCGTCTGCGG TGAGTCTTTG GCGGCACCGG 
AATTTCCGGC GGCTCTGGAT CGGCGAAACC GTCAGTCACT TCGGTACCCA GGTGAGCGTG
GTCGCGATTC CGCTGGTGGC CGTAACGACT CTCCACGCCG GTGCCCTTGC CGTCGGCCTG
CTCAGCACGC TGGAAACCAT CGCATTCGCC GTACTCGGAT TACCCGCCGG AGCATGGTGC
GACCGTTGGC GGCGTCGTCC CGTGCTCATC ACCGCGGACG TGGGACGCGC TATCGCGCTC
GCGACCGTGC CGATTGCGGC GGCCTTCCAC GTGCTCACCT TCGGCCAGCT CTGCGCCGTG
GTCACCGTGA GCGGCGTCCT CACCGTCTTC TTTGACGTGG ATTATCAAGC ATTTCTGCCA
ACGTTGGTCG GCCGAGACCA TGTCGTGGCG GCAAACGGCG CATTAGAGGC CAGCAGATCG
GCCGCGGCGC TCGGCGGGCC GAGCCTCGGT GGTCTCCTCG CACAGCTTTT CACCGCTCCC
TACGCCGTTG CCGCGGATGC AGTGAGCTTT GCCTGGTCTG CTGCGTGGAT CGCGGCCATC
GACGCTGCCG AGGTGCGCAA GCCCCGAGCA CAGTCCTCGA CAGGCCGGGA AATTCTTGAC
GGGCTTCGCT TCGTCTTCGG TCACCGGCTG CTCCGCATGC TGGCGGGCAG CACGGCGAGT
TTCAATCTTT TCAACGGACT GACCAACGCT GTCGTCGTAC TTTTCCTGGT TCGCACCGTG
GGCCTTTCGG CAGGCTCGAT CGGCGTCCTC TTCAGTGCCG CGGGTCTCGG TGGATTGGCC
GGTGCACTCG TCGCGCATCG GCTCAACCGC TCTCTCGGTT ACGCCCGGAT GATTCGCGGA
TCCGCTGCCA TCGTTGCTCT CCTCGCTCCC CTTCTCCCGC TGACCGACCG CGGATGGCGG
TTGAGCCTCT TCGTCGTGTG GTCGCTCGTC GGGTCGGCGG CGATTGCCGC ATACAACATC
GCCACGGTGT CGCTCCGGCA GGTGCTCTGC CCGCCTGAGC TCCTCGGCCG GATGAATGCG
ACCATGCGTT TCGTCGTCTG GGGAACCCTG CCGCTCGGAA GTCTGCTTGG CGGAGCGCTC
GGCGCGAACC TTGGCCTTCG CGGCGCGCTC TGGGTGGCGG CGATCGGAAC GCTCGGTAGT
CCCGCCTGGG TTTTCGCCTC TCCCCTGCGC GCCGGCCAAC CCGTCACGGA AGGGGTTTTC
TAG
 
Protein sequence
MRHRDRVTAA PSAVSLWRHR NFRRLWIGET VSHFGTQVSV VAIPLVAVTT LHAGALAVGL 
LSTLETIAFA VLGLPAGAWC DRWRRRPVLI TADVGRAIAL ATVPIAAAFH VLTFGQLCAV
VTVSGVLTVF FDVDYQAFLP TLVGRDHVVA ANGALEASRS AAALGGPSLG GLLAQLFTAP
YAVAADAVSF AWSAAWIAAI DAAEVRKPRA QSSTGREILD GLRFVFGHRL LRMLAGSTAS
FNLFNGLTNA VVVLFLVRTV GLSAGSIGVL FSAAGLGGLA GALVAHRLNR SLGYARMIRG
SAAIVALLAP LLPLTDRGWR LSLFVVWSLV GSAAIAAYNI ATVSLRQVLC PPELLGRMNA
TMRFVVWGTL PLGSLLGGAL GANLGLRGAL WVAAIGTLGS PAWVFASPLR AGQPVTEGVF