Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1320 |
Symbol | |
ID | 4486373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1468890 |
End bp | 1470119 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639730100 |
Product | type II secretion system protein |
Protein accession | YP_873078 |
Protein GI | 117928527 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0145546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA CCTACCAGTA CTCCGTTCGG GACCGCAGCG GAAAACTGCT CACCGGCACG CTGGCTGCCG ACAGTGAAAC AGCGGTCGCG CAACGACTCC GCGCGATGGG TTTCGCCCCC ATCAGCATCA ACGTGGCGAA TGCGGGTCTG AAGAAAGAAA TCAGCATTCC CGGCTTCGGC AACCGGGTGA AGATGAAGGA CCTGGCGGTG ATGTCCCGCC AGTTCGCCAC AATGATCAAC TCCGGGCTCT CGTTGCTGCG GGCACTAACC ATCCTGCGGG AGCAGACACA GAGCAAGGCG TTGCAGAAGG TCCTCACCGA GGTCCGCAAT GACGTCGAAA CGGGGAGCTC CCTGTCGGCG GCGATGAGCA AGCATCCCAG GGCGTTTCCG CCGCTCATGG TGAATATGAT CCGCGCCGGT GAGGTCGGCG GGTTCCTCGA CTCCGTCCTG TTGGAGATCG CCGCGAATTA TGAGGCGGAG GTGAAACTCC GGAGCAAGGT GAAGTCGGCG ATGACCTATC CGGTCGTCGT GCTCTGCATT TCGCTGCTCG CGGTGCTCGG CATGCTCACC TTCGTCGTCC CCGTCTTCGC GAAGATGTTC AAACAGCTGG GCGGCAAACT GCCGGCGCCG ACGCAGTTCC TGGTCACCCT CTCGCACAGC ATGAAAGTGC TGTTACCGGT GCTCATCGTG CTGGCGATTG TCGGCGGGAT TACGTGGTCG CGGATTCGGC GGACCGAAGC GGTCCGCAAC GTCGTTGACC CCTTCAAGTT GAAGGTGCCG ATTTTCGGGC AGCTCTTCCG CAAGCTCGCC CTTGCCCGGT TCGCCCGCAA CCTGGGCACG ATGATGCACT CCGGCGTGCC GATCCTGCAG GCCCTGGATA TCGTCGCTGA CACCACCGGG AATGTCGTGC TCGCTCGGGC GATCCGCGAC GTGCAGGGCA GCATCCGGAG CGGGGAATCC TTGACCGCGC CGCTCACGTC ACACCCCATC TTTCCGCCCA TGGTGGTGCA GATGATGGCG GTCGGTGAGG ACACCGGCGC GCTCGACACC ATGCTCGGGA AGATCGCGCA GTTTTACGAC CAAGAGGTCG AAGCCATGAC CGAATCGCTG ACCGCCCTCA TTGAGCCGAT CATGATTGCT CTGCTCGGCG GCATCGTCGG CTCCATGATC GTCGCACTGT ATCTGCCGAT CTTCCACATC TACGACCTGG TCTCCGGTTC GGGCGGCTGA
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Protein sequence | MTATYQYSVR DRSGKLLTGT LAADSETAVA QRLRAMGFAP ISINVANAGL KKEISIPGFG NRVKMKDLAV MSRQFATMIN SGLSLLRALT ILREQTQSKA LQKVLTEVRN DVETGSSLSA AMSKHPRAFP PLMVNMIRAG EVGGFLDSVL LEIAANYEAE VKLRSKVKSA MTYPVVVLCI SLLAVLGMLT FVVPVFAKMF KQLGGKLPAP TQFLVTLSHS MKVLLPVLIV LAIVGGITWS RIRRTEAVRN VVDPFKLKVP IFGQLFRKLA LARFARNLGT MMHSGVPILQ ALDIVADTTG NVVLARAIRD VQGSIRSGES LTAPLTSHPI FPPMVVQMMA VGEDTGALDT MLGKIAQFYD QEVEAMTESL TALIEPIMIA LLGGIVGSMI VALYLPIFHI YDLVSGSGG
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