Gene Acel_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1312 
Symbol 
ID4485467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1460702 
End bp1461367 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID639730092 
Productfimbrial assembly family protein 
Protein accessionYP_873070 
Protein GI117928519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.714725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0049251 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGTGA CTACAACCAC CCGTGTCGGT GACTTGCCCC GGGTCAATCT GCTGCCGCCG 
GAGCTGCACG AACGGCGGCG GGTCCGTGCG GCTCAGGCGG GTGCCGGTGC GGCCATCGCT
CTCGCATTGG TCGGAGTGGT TTTCGCTTAC ACGCAACAAG GGCATGCGGT TGACACGGCG
AAGAAGCAGC TCGCCGATCA GCAGCAGCAG GAAACGCAGC TCACGGCGCA GCTTCGCCGT
CTGAGTGACG TGCGCACGAC GGCGGCACAG CTTGCGGCGT CGGAGGCTTT GCTGAGCCGT
GCGATGGCCA CCGAAATTCA GTGGTCCACG TTTCTGGCCG ATTTCAGCGT TATTGTTCCC
AATTCGGTCT GGCTCGTTCA GCTCAACGCG CAGGAAGATG TGCAGCCGGG GACTCTCGCC
GCACCGAATG CCGCGCCGCA GACGGTCGGG TCGGTGACGC TGCAAGGCTA CGGAAAGGCG
TGGCCAGATC TGGCGACCTT GCTCGATTCG TTGGGGAAAG AGACGTCGCA CGGAATTGTC
CAACCGTACT TTAGTACCGC GCAAGAGACG TTCATCGGAA CGGTGAAAGT CATCCAATAT
CAGGCATCGA CGGCGCTGTC ACCGGCGGCC CTCTCCGGCC GGTGCGTGAA TCCTGGGAGT
TGTTGA
 
Protein sequence
MSVTTTTRVG DLPRVNLLPP ELHERRRVRA AQAGAGAAIA LALVGVVFAY TQQGHAVDTA 
KKQLADQQQQ ETQLTAQLRR LSDVRTTAAQ LAASEALLSR AMATEIQWST FLADFSVIVP
NSVWLVQLNA QEDVQPGTLA APNAAPQTVG SVTLQGYGKA WPDLATLLDS LGKETSHGIV
QPYFSTAQET FIGTVKVIQY QASTALSPAA LSGRCVNPGS C