Gene Acel_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1301 
SymbolpyrB 
ID4485456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1452048 
End bp1453019 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID639730081 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_873059 
Protein GI117928508 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.276181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0170425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC ACCTGCTCTC GGCTGGCGAC CTGACCCGCG ACGACGCGCT GCTCATCCTG 
GACACCGCGG CGGAACTGGC GCGGCTGGCC GACCGGCCGA TCAAGAAGCT GCCGACCCTG
CGGGGACGGA CGATCGTCAA CCTGTTCTAC GAAGATTCCA CCCGGACCCG GACCTCGTTC
GAAGCCGCCG CCAAGCGGCT CTCCGCTGAC GTGATCAACT TCTCCGCGAA GGGGTCGAGC
GTCTCCAAGG GCGAGAGTCT CAAGGACACG GCGCTCACCC TCGAAGCGAT GGGTACCGAC
GCGGTCGTCA TTCGCCATTG GGCCAGCGGT GCCCCCCATC GCCTTGCCGG CTGGGTCCGC
GGCTCGGTGA TCAATGCGGG TGACGGCACC CACGAGCATC CCACCCAGGC GCTCCTCGAC
GCGTACACGA TCCGACGGCA TCTCGGCGGT GTGGATGGGC GCCGGGTGGC GATCGTCGGC
GACATCCTGC ACAGCCGGGT CGCGCGGTCG AACGTCACGT TGCTGCACAC CCTCGGGGCG
GAGGTCACCC TCGTCGCGCC GCCGACCCTG CTCCCGGTCG GCGTGGAGAG CTGGCCGTGC
GCGGTCTCGT ATGAGCTGGA CGGCGTACTG CCGAAGTGCG ACGCCGTCAT GCTGCTCCGG
GTACAGCGGG AGCGGATGCA GGCGGCCTTC TTCCCCACCT CGCGGGAGTA CAGCCGCCGG
TATGGGCTGG ACGCCGCCCG CCTCGCGCTG CTGCCGGAGC ACGCGATCGT GCTCCACCCG
GGACCGATGA ACCGGGGCGT CGAGATCGCC GCAGAAGTCG CGGATTCGCC ACGGTCGGTG
GTGGTCGAGC AAGTCGCCAA CGGGGTCGTC GTGCGGATGG CCGTGCTCTA CCTCCTCCTT
GGCGGGGGTG AGCCCGCGCT GGCCGGACGG GCGGCCGAAC CGGCCGCGGC CGCGATCGGG
GGTGGCTGGT GA
 
Protein sequence
MMRHLLSAGD LTRDDALLIL DTAAELARLA DRPIKKLPTL RGRTIVNLFY EDSTRTRTSF 
EAAAKRLSAD VINFSAKGSS VSKGESLKDT ALTLEAMGTD AVVIRHWASG APHRLAGWVR
GSVINAGDGT HEHPTQALLD AYTIRRHLGG VDGRRVAIVG DILHSRVARS NVTLLHTLGA
EVTLVAPPTL LPVGVESWPC AVSYELDGVL PKCDAVMLLR VQRERMQAAF FPTSREYSRR
YGLDAARLAL LPEHAIVLHP GPMNRGVEIA AEVADSPRSV VVEQVANGVV VRMAVLYLLL
GGGEPALAGR AAEPAAAAIG GGW