Gene Acel_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1266 
Symbol 
ID4486337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1414306 
End bp1415313 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID639730046 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_873024 
Protein GI117928473 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.227258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAC CGGTCGAGGC CGAGAAGACG GCCTTTGACC TGCTGCCCGA CGGCTTGTTG 
ATCGCGGACG ACGCTGGGCG GGTGGTGCTG CTCAACGAAA TGGGCGCCCG TCTCCTGCAG
TGTTCCGCGG ATGCCGCGCT GGGCCGCGAT TTCCGTTCCG TCCTGCCGTT GGTCGACACC
GCCGGCCGCG ACTGCGAGCG GCGGCTCCTC CTGCCCGACG GCCGCGAGCT TCTCGTCACC
GCCCGGTTCG TCCGCGAAGC CCGCGGCGCT CCGGTCAGCC GATTGGTCGT GAGCTTTCGT
GCGGCGGCGG CCCGGGAACG CGCCGAGCGG GACCGAGCCG AGCTGATCTC CACCGTGGCG
CACGAACTCC GCTCACCCCT GACCAGCGTC AAGGGCTTCA CCGCAACGCT GCTGCACAAG
TGGGATCGGT TCACCGACGA ACAGCGCAAG CTCATGCTCG AGACAGTGAA CGCGGACGCC
GACCGGGTGA CCCGCCTCAT CGGCGAACTG CTGGACGTCT CCCGAATCGA CGCCGACCGT
CTTGAACTCC ATCGCCAGGT GGTTGACGTC GGCGCCGCGG CGGCGCGGGT GGTGGCAGGC
CGCGTGGCGG CCGGCGAGTC TCCGCAGCGG TTCTCCGTGA TCGTCGACGG CGAGCTGCCG
GAGGTCTGGC TCGACCCCGA CAAGCTCGAT CAGGTTCTGG CCAATCTGGT GGACAACGCG
ATTCGGCATG GTCGCGGCAC GGTGACGGTC CACGTTGCAC CAGCTCCGGG GGAGGGTGTC
GACATCACCG TCACGGATCA GGGTGACGGC GTTCCGCCGG AGGTCCGTCC GCTCATCTTC
CGTCGGTTCT GGCGCGCAGG GCGGTACGGC GGCACCGGCC TCGGGTTGTA CATCGTCAAG
GGTCTGGTGG AAGCGCACGG CGGCACGGTC TCGGTGGACG ACGCCCCGGG TGGCGGCGCG
CTGTTCCGGG TCCGGTTTCC CGCCGGCACC CCACCGTTCG CTCGGTGA
 
Protein sequence
MAGPVEAEKT AFDLLPDGLL IADDAGRVVL LNEMGARLLQ CSADAALGRD FRSVLPLVDT 
AGRDCERRLL LPDGRELLVT ARFVREARGA PVSRLVVSFR AAAARERAER DRAELISTVA
HELRSPLTSV KGFTATLLHK WDRFTDEQRK LMLETVNADA DRVTRLIGEL LDVSRIDADR
LELHRQVVDV GAAAARVVAG RVAAGESPQR FSVIVDGELP EVWLDPDKLD QVLANLVDNA
IRHGRGTVTV HVAPAPGEGV DITVTDQGDG VPPEVRPLIF RRFWRAGRYG GTGLGLYIVK
GLVEAHGGTV SVDDAPGGGA LFRVRFPAGT PPFAR