Gene Acel_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1199 
Symbol 
ID4486053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1337659 
End bp1338897 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID639729975 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_872957 
Protein GI117928406 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.517255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACG ACGTCGTCGT CACCGGAATC GGCGCAATTA CCCCGGTGGG ACTCAGTCGC 
GAAGCAACCT GGGAAGCCCT CTGCGCCGGG AGATCCGGAG TCGGCCTCAT CTCGTCGTTT
GACGCGACTT CTCTGCCGGT TCGGATCGCC GCCGAGGTGC GGGACTTCGA CCCGGCAGCG
CTGCTCGACG CCAAGCGGCT GCGGCGGACC GCCCGGTTCA GCCAATTCGC CATCGCTGCG
GCACGCGAAG CTATTCAGGA CGCCGACATC ACCATCACTA CACGGAATTC CGAGCGGATC
GGTGTCGTCA TCAATGCGGC GGTCGCCGGA TTCGACACCG TTGAGCAGGC CACCCGCCGG
TTGGCGGCAA ACGCCTCCGC ACGGTTGAGC CCGTACTTTG TCGCCTCGTC GTTGACCAAC
ATGCCGGCGT GCGAGGTCGC CATGGACCTC GGCATCCACG GTCCCGTCAC GGCGAGCGCA
CTGGCGTGCG CCAGCGGCCT GTACGCCGTC GTCGAGGGTG CGCGATTGAT TCGATCCGGC
GAGGCGGATG TCGTCCTCTG CGGGGGGACC GATGCGGCGA TCACGCCCGT CATGTTCGCC
GGCTTGGCAG CCACCGGAGC GCTCTCCCGC CGGAACGACG ACCCGGCCGC TGCGAGCCGC
CCGTTTGACG CCGACCGGGA CGGGTTCGTC TTCGGCGAAG GTGCGGTCGT CCTGGTCCTC
GAATCGGCGG AGCACGCTCG ATCGCGCGGC GCCCGTTGCT ACGCGGCGTA CGCAGGCGGT
TCGCTCACCT GCGATGCATT TCACGTCACT GCGCCGGACC CCAGCGCGGA ACACGCCACG
GCGGCCATCA ACCAGGCACT GAAGAGCGCT GGAGTCGCGC CGGCCGATGT GGACTACATT
TGCGCCCACG GAACCGGGAC GAAGGCCAAC GACCGGCAGG AGACCCGGGC GATCCGGCAG
GCGTTCGGCG CGACGGCTGA CGAGGTTGCC ATCAGCAGTC CGAAGTCGAT GGTCGGCCAT
CTCATCGGTG CCGCCGGTGC CCTCGGGGCG ATGGTCGCTG TGCTGGCCAT CCGCGACCAA
CGGGTGCCAC CGACGATCAA CTTGGATACC CCGGATCCGG AGTGCGACCT CGACTACGTC
CCGAAGGTTG CGCGCACGAT GCTCGTTCAC ACCGCGATGA CGCAGGCATT CGGCTTCGGG
GGACAGAACT GCGTAGCCGT CTTCACCCAA CCGCGCTGA
 
Protein sequence
MIDDVVVTGI GAITPVGLSR EATWEALCAG RSGVGLISSF DATSLPVRIA AEVRDFDPAA 
LLDAKRLRRT ARFSQFAIAA AREAIQDADI TITTRNSERI GVVINAAVAG FDTVEQATRR
LAANASARLS PYFVASSLTN MPACEVAMDL GIHGPVTASA LACASGLYAV VEGARLIRSG
EADVVLCGGT DAAITPVMFA GLAATGALSR RNDDPAAASR PFDADRDGFV FGEGAVVLVL
ESAEHARSRG ARCYAAYAGG SLTCDAFHVT APDPSAEHAT AAINQALKSA GVAPADVDYI
CAHGTGTKAN DRQETRAIRQ AFGATADEVA ISSPKSMVGH LIGAAGALGA MVAVLAIRDQ
RVPPTINLDT PDPECDLDYV PKVARTMLVH TAMTQAFGFG GQNCVAVFTQ PR