Gene Acel_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1156 
Symbol 
ID4484500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1282878 
End bp1283834 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID639729931 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_872914 
Protein GI117928363 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.149138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.809172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGG CTGTCATCGC CCTTATCGTT ATTGCCATCT TCGTCCTCAT CGTGCTCGGC 
CGATCGGTGC GGATCGTGCC GCAGGCCCGC GCCGGAATCG TTGAACGACT CGGCCGCTAC
CACCGCACCC TTGCACCCGG GCTCAACGTC GTCGTGCCGT TCATCGACCG GATCCGGCCT
CTCATCGACA TGCGGGAGCA GGTCGTCTCT TTCCCGCCGC AGCCTGTCAT CACCCAGGAC
AACCTGGTCG TCGGCATCGA CACCGTCTTG TATTTCCAAG TTACGGACGC AAAAGCCGCA
ACCTATGAAA TAGCGAACTA CATTCAGGCG ATTGAACAAC TCACTGTCAC GACGTTGCGG
AATGTCATCG GCGGCATGGA TCTGGAAAAG ACCCTCACCT CACGGGAGGA GATCAACGCC
CAGCTCCGCG GCGTCCTTGA CGAAGCCACC GGCAAGTGGG GAATCCGCGT CAACCGGGTC
GAATTGAAAT CGATTGATCC GCCGCTGTCC ATTAAGGATT CGATGGAGAA GCAGATGCGT
GCGGATCGGG ACAAGCGCGC CGCGATTCTG CTTGCCGAGG GACAGAAGCA GGCCCAAATC
CTAACCGCGG AAGGGGAGAA GCAGGCCGCG ATTCTCCGGG CCGAAGGTCA GGCGCAGGCG
GCGGTCACGC AGGCCCGTGC CGAAGCCGAG GCGCAGGCGC TGCGGGCCAA CGGCCAAGCC
CAAGCCATCG GGACGGTCTT CCGCGCGATT CACGAGGGAA AGGTGGACCC AGATCTCCTG
GCCTACCAGT ACCTGCAGGT ATTGCCGCAA ATCGCGCAGG GTGATGCGAA CAAGGTGTGG
ATCGTTCCGA GCGAAATCAG CAAGGCGCTC GAGGGTGTCG GCAATCTTTT CGGCCGAGCC
GCCGCGCCGG GCAATCCCGA CGGCGCCGCC GCTCAACGGA CCACAAGCCC GGAGTGA
 
Protein sequence
MPAAVIALIV IAIFVLIVLG RSVRIVPQAR AGIVERLGRY HRTLAPGLNV VVPFIDRIRP 
LIDMREQVVS FPPQPVITQD NLVVGIDTVL YFQVTDAKAA TYEIANYIQA IEQLTVTTLR
NVIGGMDLEK TLTSREEINA QLRGVLDEAT GKWGIRVNRV ELKSIDPPLS IKDSMEKQMR
ADRDKRAAIL LAEGQKQAQI LTAEGEKQAA ILRAEGQAQA AVTQARAEAE AQALRANGQA
QAIGTVFRAI HEGKVDPDLL AYQYLQVLPQ IAQGDANKVW IVPSEISKAL EGVGNLFGRA
AAPGNPDGAA AQRTTSPE