Gene Acel_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1104 
Symbol 
ID4485767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1221375 
End bp1222619 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content66% 
IMG OID639729879 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_872862 
Protein GI117928311 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.359482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.264613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGCG TCGTCGTGGT CGGCGCGTCG GTAGCGGGAC TTCGAGCGGT TGAATCGCTG 
CGCAGGAACG GATTCGCCGG CGAAATCCTC GTTATCGGCG GTGAGCGCTG GCCGCCGTAC
AACCGCCCGC CGCTCTCCAA GACCGTTCTC ACGGCTACCG AATTGCCGGG CTTCGATGAG
ATCGCGCTTC CTCTTTCGCC ACGGATCGGT GACGTCCAAT GGCGGTTGGG TGTCCGTGCG
GCGGCGTTGG ACGTGGACGC ACGCGTCGTC GTCCTCGAGG ACGGCCAAAC GGTCGAGTGG
GACGGTCTCG TTATCGCGAC CGGACTGCGA CCGGTGCGGT TGGCTGTCCC CGGGCCGACG
GTGAGGCGGT ACGTGCTTCG CAATTTTGAT GACGCGCGGG CACTCCGAGA CGTGCTGCAG
CCCGGTGCCC GGCTTGTCGT GATCGGTGCG GGGTTCATTG GTTGCGAGGT CGCCTCCGCC
GCGAGGGAAC GCGGGGTCCA CGTGGTCGTT GTCGGACGCT CGGAATACCC TCTTCCCGGG
CTGGGCGACA TTCTGGGAAG CGAACTGCGG AGACTTCACG AGACACATGG CGTCCGCTTC
CTCGGAGCAC GAGCGGTCGT TGCTTTCGAG GGAACCGACC ATGTACGCGG TGTAGTCCTC
GACGACGGCA CCGAACTGGC CGCCGACATC GTCGTTGAAG CAATCGGCGG CGCCCCGGAG
ACGGATTGGC TCGTAACCAC CAAGCTCGAC ATCCACAACG GCGTGCGGTG TGACGGAATG
TTACGAGCAC TCGACATTTC GGGACAGCCC ATACCCAACG TCGTGGCATG CGGTGATGTC
GCACGAGTGC CCCTGCTGCG CGGGGCGGGA ATTGAAGGCC GAGTGGAGCA CTGGTCAATG
GCCATTGAGA CGGGACGGTA CGCCGGCCGC ACCCTCGCTG CATCCTTGTC CGGTGCGGCG
GCAGGTGCGC CGTCTGTGCC GATGGTGCCG ACGTTCTGGT CAGACCAATA TGGCGTTCGG
CTCTCCGGCG TGGGTCTGCC TGAGATGCAT GACGGCGAGA TCCGGGTACG GCATGACAGC
GCGGCCGGCG AAGTCGCGAT CTCGTACTTC CGGGCCGGAC GGTTGATCGG CATCGCTGCA
CTCGGCTGTG CCGCACGACT CCCGGAGTTT TACGACGCGG TCCGGCGCTC CTGGCAGGAT
GAGGGCCACC CGGTCTCGAC CGTGACTCGG TCGTCGCCGC GCTAA
 
Protein sequence
MQRVVVVGAS VAGLRAVESL RRNGFAGEIL VIGGERWPPY NRPPLSKTVL TATELPGFDE 
IALPLSPRIG DVQWRLGVRA AALDVDARVV VLEDGQTVEW DGLVIATGLR PVRLAVPGPT
VRRYVLRNFD DARALRDVLQ PGARLVVIGA GFIGCEVASA ARERGVHVVV VGRSEYPLPG
LGDILGSELR RLHETHGVRF LGARAVVAFE GTDHVRGVVL DDGTELAADI VVEAIGGAPE
TDWLVTTKLD IHNGVRCDGM LRALDISGQP IPNVVACGDV ARVPLLRGAG IEGRVEHWSM
AIETGRYAGR TLAASLSGAA AGAPSVPMVP TFWSDQYGVR LSGVGLPEMH DGEIRVRHDS
AAGEVAISYF RAGRLIGIAA LGCAARLPEF YDAVRRSWQD EGHPVSTVTR SSPR