Gene Acel_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1018 
Symbol 
ID4485022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1124662 
End bp1125495 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID639729793 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_872777 
Protein GI117928226 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0184891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGTC TGCCTCAGCA CAGTGCTCCG CCGCAGCGCT CTGCCCGGCC GACCCTCGCG 
GTCTGGAAGT TTGCATCGTG CGATGGGTGT CAGCTCAGCC TCCTCGACCT CGAGGATGCC
CTCCTCACCC TTGCTGAGGT CGTCGAGATT GCCGAATTTC ACGAGGCGAC CAGCCGGAAC
GTGGCCGGGC CGTACGACCT TTCGCTTGTG GAGGGTTCGG TGACGACAGA GCATGACGCC
GAGCGGATTC AGGAGATTCG CCGAGCGTCA CGAACCTTGG TGACCATCGG CGCGTGTGCG
ACGGCAGGCG GCATTCAGGC GCTGCGGAAC TTCGCCGACG CCGGGGAATT CGCCCGCACG
GTGTATCCAA CTCCCGGTTA CATTGCGAGT CTGGCGACGT CGACGCCGAT TTCCGCCCAT
GTCCAGGTCG ATTTCGAGCT GTCCGGCTGT CCCGTCAATA AAGACGAACT GCTCGAAGTG
ATCCAAGCAT TTCTCGTCGG CCGGCGGCCG GGCATCGCCA CCACCAGCGT ATGCATGGAG
TGCAAGCGTC GCGGGACCGT CTGTCTTACC GTTGCGCGCG GTATTCCGTG CCTTGGGCCG
GTGACTCGCG GCGGATGTGG GGCCATCTGC CCAGCGTACG ATCGCGGCTG CTACGGGTGT
TTCGGTCCAA TGGAGTCACC GAACACCGCT GCGCTGGTCC GGAGGCTGCG ACGAGACGGA
ATGGCCGAGC GGGACGTGCA TCGCGTCTTT CAAACGTTCA ACGCCGCTGC CCCGGCGTTT
CGTTCAGTCG TCGATCGCTC GACTTTCCGC TCGGAGGATG CCGATGTCCG CTGA
 
Protein sequence
MTSLPQHSAP PQRSARPTLA VWKFASCDGC QLSLLDLEDA LLTLAEVVEI AEFHEATSRN 
VAGPYDLSLV EGSVTTEHDA ERIQEIRRAS RTLVTIGACA TAGGIQALRN FADAGEFART
VYPTPGYIAS LATSTPISAH VQVDFELSGC PVNKDELLEV IQAFLVGRRP GIATTSVCME
CKRRGTVCLT VARGIPCLGP VTRGGCGAIC PAYDRGCYGC FGPMESPNTA ALVRRLRRDG
MAERDVHRVF QTFNAAAPAF RSVVDRSTFR SEDADVR