Gene Acel_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1011 
Symbol 
ID4485015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1117324 
End bp1118757 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content72% 
IMG OID639729786 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_872770 
Protein GI117928219 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0600582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCG ATCAATCCCT GAGTCACCAC GAGCCGCTGC CGCTCGAACG CCTTGGCCGG 
ACGCATTTCG TCGGCGTCGG AGGCGGGGGC ATGTCCGGCA TCGCGCGGAT CTTCCTCTCC
CGCGGCGTCC CGGTCTCCGG ATGCGATGCC CGGGAGAGCA GGGTGCTGGC GGCGCTGCGC
GCGTTCGGAG CCCGGGTGAC CGTCGGCCAC GACCCAGCGC ATCTGTCCGA CGTCGACACG
GTGGTGGCGT CGACGGCGGT GCCGCCGACG ACGCCCGAGC TGGCCGTGGC CCGGGAGCGG
GGGCTCCCGG TGTTGCCGCG GGCGGCTGCC CTGGCGAGCG TGATGGCGGG CCGACGCGGT
GTCGCGGTCG CCGGTACGCA CGGCAAGACC ACGACGACGT CGATGGTGGT TCGGGCGTTG
CAGCGGTGCG GCGCGGACCC CTCGTTCGCG ATCGGCGCCG ATCTGGGCGA ACCGGGGTCC
AATGCGCACG ACGGCACCGG ATCGATCTTT GTCGCCGAGG CGGATGAGAG CGACGAATCG
TTTCTCCTGC TGCCGTTCCA CGCTGCAGTG GTGACCAACG TAGAGGCGGA TCACCTGAAC
CACTACGCCG ACCTTGCCGC CATCCACGCC GCGTTCGATC GCTTCGTTGC CAAGGTGCCC
GACGGCGGCT TTCTGGTGGC GTGTACCGAC GATCCCGGCG CCGAAGAGAT CGCCAGCCGT
GCGGCGCGAC GCGGCACGGT CGTGCGACGG TACGGCACCA GCCCGCGGGC CGACGTCCGG
CTGGTCGATC TCCGACTGGA GGTCGCGGGC AGCCGTTTCG CCGTGGCGAT GGACGGGACG
GTGCTCGGCG AGCTGCAGTT GCGGGTTCCC GGCGCGCACA ACGCGCTGAA TGCGACCGCC
GCTGTTGCGG TGACGGTCGG TCTCGGTTTC CCGTTCAGCG AGGTCGCGGA GGGTCTCGCA
GACTTCACCG GGGCGCGGCG ACGCTTTCAG CCGCAGGGCG AGGTTGCCGG CATCCGGGTG
TTCGACGACT ACGCCCATCA CCCGACGGAG ATTGCCGCGA CGTTGCGGGC TGCACGGGTG
GTGGCGGACG GCGGCCGGCT CGTCGTCGCC TTTCAGCCGC ACCACTACTA CCGGACGGCG
GATTTCCGGA CCGAGTTCGG CGCGGCGCTC GCGCTCGCCG ACGAGGTCGT CGTCATGGAG
GTCTACGCGC CGGGGGAGAC GCCGCTGCCG GGCGGTACTG GCGCGGCGCT CGCCGCCGCG
GTGCCGCTGC CGGGGTCTGC CGTGGTTTTC GAGCCGTCGT GGTCAGCGGT TCCGGAGCAT
CTGGCCGCCC GGGCCCGGCC GGGTGATCTG ATCGTGACCA TGGGGGCGGG CGGCGATGTC
GCGCTGCTGC CGCCGTTGGT GCTCGACGCG CTGCGCCGCC GCTGGCAGGG CTGA
 
Protein sequence
MTSDQSLSHH EPLPLERLGR THFVGVGGGG MSGIARIFLS RGVPVSGCDA RESRVLAALR 
AFGARVTVGH DPAHLSDVDT VVASTAVPPT TPELAVARER GLPVLPRAAA LASVMAGRRG
VAVAGTHGKT TTTSMVVRAL QRCGADPSFA IGADLGEPGS NAHDGTGSIF VAEADESDES
FLLLPFHAAV VTNVEADHLN HYADLAAIHA AFDRFVAKVP DGGFLVACTD DPGAEEIASR
AARRGTVVRR YGTSPRADVR LVDLRLEVAG SRFAVAMDGT VLGELQLRVP GAHNALNATA
AVAVTVGLGF PFSEVAEGLA DFTGARRRFQ PQGEVAGIRV FDDYAHHPTE IAATLRAARV
VADGGRLVVA FQPHHYYRTA DFRTEFGAAL ALADEVVVME VYAPGETPLP GGTGAALAAA
VPLPGSAVVF EPSWSAVPEH LAARARPGDL IVTMGAGGDV ALLPPLVLDA LRRRWQG