| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1006 |
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| Symbol | |
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| ID | 4485010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 1110961 |
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| End bp | 1112382 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639729781 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_872765 |
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| Protein GI | 117928214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000549268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0206005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGC TGCCGCTTCG ACTGGTCGCC CAGCTCGCCG GCGGCGGTCT CGCCGACGTC
CCGGACCCTG AGCGGCCGGT GACCGGCCCG GTTGTCGCGG ACTCCCGGCA GGTGACGCCC
GGCGGGTTGT TTGTCGCGAT TCGGGGCGCA CGGGTCGACG GGCACGCGTT CGCGGAACAG
GCGGTGTCAG CCGGGGCGGT TGCCGTCCTG GCCGACCATC CGGTCGGCGT ACCGGCGATC
ATCGTGGATG ACACGGTCCG CGGTCTTGGT CGGCTGGCCC ACGGCTATCT CGACCTCCTG
CCGGACCCGG TGGTCATTGG GATCACTGGG TCCAGTGGAA AGACCTCGAC GAAGGATCTC
GGTGCGCAGG TGCTGGCCCG GCTTGGCCCG ACCGTTGCAC CCACCGGGTC GCTCAATACC
GAGGTCGGGC TGCCGCTCAC AGTCCTCCGG GCCGATCGGG ACACCCGGTT TCTCGTGTTA
GAGAAGAGCG CCCGCGGGGT CGGGCACATC GCGTATCTCT GCCGCATCGC CCCGCCGCGC
ATCGGGGTGG TGTTGAACGT CGGCTCGGCG CACCTCGGCG AGTTCGGCAG CCGGGAAGCC
ATTGCCCAGG CGAAGGGGGA GCTGGTCGAG GCGTTGCCCG CGGACGGCAC GGCCGTGCTC
AACGCGGACG ATCCGCTGGT GCTGGGGATG CGACACCGGA CGCGGGCACG TGTCGTCACG
TTCGGGACCT CCGCAGACGC CGACGTGCGG GCAACGGAGA TCATGACCGA TGCGACGGCC
CGGCCGAGCT TCCGGCTGTG CTTCCCGGAC GGTGCCGGGT TGCCGGTCGC GCTGCAGATG
CACGGCGTCC ACCACGTCTC CAACGCACTC GCGGTAGCGA CGGTCGCCTG GGTGCTCGGA
CTCGGTGCTG AGGAGATCGC TGCCGCGCTC CGGGAGGCCA GGCCGCTCAG CCGATGGCGG
ATGGAGGTCA CCACCCGGGA CGACGGTGTC ACGGTGATCA ACGACGCGTA CAACGCCAAC
CCCGAATCGA TGACCGCGGC GCTGACCGCG CTCGCCGCCG CGACCGCAGC CCGCCGGATC
GCCGTCCTCG GGCCGATGGC CGAACTCGGG CCCGCCGCGC CGGCGGCGCA CGCGGAGGTC
GGCGAGACGG CGGCCCGGGT TGGCGTGGAC TGGCTGATCG TTGTCGGCGC GGACGCCACA
CCGATCGCCG ACGGGGCACG CCGTGGCGGG CTTGCCGCGG AGGCGGTGAC CGTTGTACCG
GACGCCGCCG CGGCAACAGC CCTGTTGACG CCGGCGCTGC GCGCCGGGGA CGTGGTCGTG
ATCAAGGCGT CGCGATCGTA CGGGTTGGAG CAGGTCGCCG CCGCGCTGCT CGCCCAGACA
CCAGCCGTCG CGTCGCCGGT CGCTGAGGGG ATCGGCCGGT GA
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| Protein sequence | MIPLPLRLVA QLAGGGLADV PDPERPVTGP VVADSRQVTP GGLFVAIRGA RVDGHAFAEQ
AVSAGAVAVL ADHPVGVPAI IVDDTVRGLG RLAHGYLDLL PDPVVIGITG SSGKTSTKDL
GAQVLARLGP TVAPTGSLNT EVGLPLTVLR ADRDTRFLVL EKSARGVGHI AYLCRIAPPR
IGVVLNVGSA HLGEFGSREA IAQAKGELVE ALPADGTAVL NADDPLVLGM RHRTRARVVT
FGTSADADVR ATEIMTDATA RPSFRLCFPD GAGLPVALQM HGVHHVSNAL AVATVAWVLG
LGAEEIAAAL REARPLSRWR MEVTTRDDGV TVINDAYNAN PESMTAALTA LAAATAARRI
AVLGPMAELG PAAPAAHAEV GETAARVGVD WLIVVGADAT PIADGARRGG LAAEAVTVVP
DAAAATALLT PALRAGDVVV IKASRSYGLE QVAAALLAQT PAVASPVAEG IGR
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