| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0943 |
|---|
| Symbol | |
|---|
| ID | 4484893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1039464 |
|---|
| End bp | 1041107 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639729718 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_872702 |
|---|
| Protein GI | 117928151 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.742397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.41118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCACCT TCGATCGAGT GACGTTCCGG TACCCGGAGA CCGACCGGCC GGTCCTCGAC
GGCGTCACTC TCGCGATCCC CGAGGGAGAG CTCACCCTGG TGGTCGGCGG CACGGGGTCG
GGCAAGTCGA CGCTGCTGCG TGCGGTCAAC GGTCTCGTCC CGCACTTCAC CGGTGGGCAC
CTCGCCGGCC GAGTGATCGT CGCAGGGCGG GACACCAGGG ATCACCCGCC CCGCGAGCTC
GCCGACATCG TCGGTTACGT CGGCCAGGAC CCGGCGGCCG GTTTCGTCAC CGACACGGTC
GAGGACGAGC TCGCCTACGC CATGGAGTGG CTAGGTGTGC CGCCGGCCAC GATGCGCCGT
CGGGTGGAAG ACATCCTCGA TCTCCTGGAC CTCTCCGCGC TGCGGTCCCG CCGGCTCGGC
GACCTTTCCG GCGGCGAGCA GCAACGCGTC GCCATCGGCG CCGTGCTCAC GGCGGGGCCG
CGGATTCTCG TCCTCGACGA GCCGACGTCG GCGCTGGACC CGCCGGCAGC CGAAGAGGTG
CTGGCCGTCC TCACCCGGCT GGTGCACGAC CTCGGGATGA CCGTGCTGGT GGCCGAGCAC
CGGTTGGAAC GGATCGTTCA GTACGCCGAC CGCATCCTGC TCCTGCCCGG TGACGGCCGC
GTCGTCGCCG AATCGCCGGC CGCGGCGATG GCCGTCTCCC CGCTGGCCCC GCCGGTCGTC
CACCTGGCCC GGCTCGCCGG ATGGCATCCG GTGCCCCTCT CGATCCGGGA CGCCCGACGA
CACGCCGAAC AGCTTCGCGA TCGCCTCGCC ACCCTGACCG CGGCTGCGGC GAACGGCACC
CACCGGTCGC CGGCCGCACG CTCCGAACCG ACCGCTCATC ACGACGGGTT GGGACGACCC
ACCCCTGATC CGGTGGTCGA CGTCCGGAGA CTGACCGCCG GATATGACGG GAGACCGGCG
CTCCGTGACG TCACGATTCA GGTGGACGCC GGTGAGATTG TCGCGGTGAT GGGCCGGAAC
GGCGCCGGGA AAACCACGCT CCTCGCGCAC ATCGCCGGGC TTGCGGTGCC GTGGCGCGGG
GACGTCCGAG TCTGCGGCGC AGCACCACAC CGACTGTCGG CGGGCGGGCT CGTGCGGTGC
GTGGGCTTCG TCCCGCATGA ACCGAGCGAT CTGTTCTATG CCGACACCGT CGCCGGGGAG
CTGGCCGACC TCCCCGACGG CCTGTCCACC CTCCAGACCA TCGCCCCTGA CATCGAGCCA
CACCGCCATC CGCGCGACCT GTCCGAGGGT GAACAACTCG CCGTCGCCTT GGCGGTGGTC
CTGTCCCGGC GGCCGCGGGT CCTCGCCCTC GACGAGCCGA CCCGGGGTCT TGACTACACC
GCGAAGGCAC GGCTCGCCGC CCTCCTCCGA ACCCTCGCCC GCTCCGGGAC GGCGATCCTG
CTGGCGACCC ACGACGTCGA ACTCGCCGCG GAGGTGGCGA CCCGCACGGT CGTCCTCGCG
GAGGGTGAGG TCGTGGCGGA CGGCCCGACC GCGAGCGTGG TCACCGCGAC ACCAGCGTTC
GCTCCGCAGG TGGCCCGCAT TCTCCACCCG CTGCCGTGGC TAACGGTGGC GGACGTCGCC
GCAGCGTTGG CAGGCAGCCG ATGA
|
|---|
| Protein sequence | MITFDRVTFR YPETDRPVLD GVTLAIPEGE LTLVVGGTGS GKSTLLRAVN GLVPHFTGGH
LAGRVIVAGR DTRDHPPREL ADIVGYVGQD PAAGFVTDTV EDELAYAMEW LGVPPATMRR
RVEDILDLLD LSALRSRRLG DLSGGEQQRV AIGAVLTAGP RILVLDEPTS ALDPPAAEEV
LAVLTRLVHD LGMTVLVAEH RLERIVQYAD RILLLPGDGR VVAESPAAAM AVSPLAPPVV
HLARLAGWHP VPLSIRDARR HAEQLRDRLA TLTAAAANGT HRSPAARSEP TAHHDGLGRP
TPDPVVDVRR LTAGYDGRPA LRDVTIQVDA GEIVAVMGRN GAGKTTLLAH IAGLAVPWRG
DVRVCGAAPH RLSAGGLVRC VGFVPHEPSD LFYADTVAGE LADLPDGLST LQTIAPDIEP
HRHPRDLSEG EQLAVALAVV LSRRPRVLAL DEPTRGLDYT AKARLAALLR TLARSGTAIL
LATHDVELAA EVATRTVVLA EGEVVADGPT ASVVTATPAF APQVARILHP LPWLTVADVA
AALAGSR
|
|---|
| |