Gene Acel_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0901 
Symbol 
ID4485806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp993036 
End bp993749 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID639729676 
Producthypothetical protein 
Protein accessionYP_872660 
Protein GI117928109 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0250071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGAAC TGCAAGGCCT CGACTCGACC CTCGACCGGT TGGATCACCG CCGGCGGACA 
CTCCCCGAAG CAGCAGCCGT TGCGGAGATT GAACGCCGGA TCGCCGACGC CAACGACGCC
CTGGTGGCTG CCCGCACCCG CGACGCCGAT CTGGCCCGCG AGCAGGCGAA GGTGGAGGCC
GACGTGGAGA CGGTCCGCGC CCGCACCGAG CGGGACCAGA AGCGGCTGGA CGACGGCAAC
GTCGCCTCGC CGCGGGAACT GGAGAATCTG CAATCGGAGA TCGCGTCGCT CCGGCGGCGG
CGCAGCGAAC TCGAGGACCA GATCCTCCAG ATCATGGAAC AGCGGGAGGC CCTCCAGGCC
GAGATCGACG CGTTGAGCGC GGACGTCGCG AAACTGGAGG GCGAACGCGC CGAGCTGATC
AAGCGCCGAG ATCAGCTGCT CGCCGAGATG GACGCCGAGG CCGCGACCAC CAAGGCGGCC
CGCGATGCCC TTGCCCCACA GCTGCCGGCA GAGCTTCTCA GTCTGTATGA ACGGTTGCGG
GCCTCGCTGG GCGGTGTCGG CGCGGCAGCC CTGCACCGGG GGCAATGCCA GGGTTGCCAT
CTCACCTTGA ATCCCGCCGA CCTGCAGCGC ATCCGAGCCG CGGCGCCGGA CGAGGTGGTG
CGATGCGAGG AGTGCGGCCG GATTCTCGTG CGGACGCCGG AGTCCGGTCT GTGA
 
Protein sequence
MLELQGLDST LDRLDHRRRT LPEAAAVAEI ERRIADANDA LVAARTRDAD LAREQAKVEA 
DVETVRARTE RDQKRLDDGN VASPRELENL QSEIASLRRR RSELEDQILQ IMEQREALQA
EIDALSADVA KLEGERAELI KRRDQLLAEM DAEAATTKAA RDALAPQLPA ELLSLYERLR
ASLGGVGAAA LHRGQCQGCH LTLNPADLQR IRAAAPDEVV RCEECGRILV RTPESGL