Gene Acel_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0900 
Symbol 
ID4485805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp991828 
End bp993009 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID639729675 
Producthypothetical protein 
Protein accessionYP_872659 
Protein GI117928108 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00277153 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC GCGACGCTGC GGAGACGCCA CCCGCTCCGC CCACGCTGCG CGACGTGGTC 
GCCGTCCTCA ATCAGTTGTA TCCGCCGGCC CTCGCGGCCG AGTGGGACGC CGTTGGGCTG
GTCTGCGGTG AGCCCAGCCA GGCGGTCCGC CGGATTCTCT TCGCAGTAGA CCCGGTGCCG
TCCGTCGCGG CGGAAGCCAT CGAACGAGGC GTTGACCTCC TCGTCACCCA CCATCCGCTG
TACCTGCGCG GAACATCCTC AGTAGCGGCG ACGACCGCGA AGGGCCGAGT CGTTCACGAA
CTGATTCGCG CTGGGATAGC TCTGTTCACC GCGCACACGA ATGCTGATCA CGCGAATCCG
GGTGTCTCGG ATGCGCTCGC CGCTGCCCTC GGGGTGACGG AACTGCGTCC GCTGGACCCC
CTGCCCGCCC AGCCGATCGA CAAGCTCGTC ACCTTCGCGC CGGCTGATGC TGTGGAACGG
ATACTGGACG TTCTCTCGGC GGCCGGCGCC GGCGCCATCG GCGCTTACAG CCGGTGCGCG
TGGACAACGG ACGGCATCGG TACGTTCCGG CCGAATCCCG GGGCTCACCC GACGATCGGC
ACGATCGGGA GGATTGAGAC CGTTCCCGAA GTGCGGGTGG AGATGGTCCT GCCGCGTGCC
CGGCGCGACG CGGTGATTGC CGCCCTGCTG GCGGCACATC CCTACGAGGA GCCTGCGTAC
GACGTCATTC CGTTGGCCGA GCGACCCGGC CGGGCCGGCA CCGGACGGAT CGGCAGACTG
GACCAGCCGG AGTCATTAGC GGACTTCGTC GATCGGGTCC GGGCGGCACT GCCGGCGACC
CCTGGCGGCG GGCGGTACGC CGGTGATCCC GATCGCCTCG TGCACATTGT CGCGGTGTGC
GGCGGCGCGG GTGACGGCTA CCTGCAGACC GCGGCCGGCG CGGGCGCGGA CGTGTACGTC
ACCGCCGACC TGCGGCACCA CCCGGCGTCC GAAATCACGG CCGAGACCGG CATCGCCCTG
GTCGACATGC CGCACTGGGC CACCGAATGG CCGTGGCTTC CGGACGCCGC GGCCCGGCTG
CGCGAGGCGC TCGGAGCGGC CGGCTTTACG GTGAACATCG AGGTCTCGAC TTTGGTGACC
GACCCGTGGG ACGGACGCAT TCCGGGAGGA GGTTCGCGCT GA
 
Protein sequence
MTARDAAETP PAPPTLRDVV AVLNQLYPPA LAAEWDAVGL VCGEPSQAVR RILFAVDPVP 
SVAAEAIERG VDLLVTHHPL YLRGTSSVAA TTAKGRVVHE LIRAGIALFT AHTNADHANP
GVSDALAAAL GVTELRPLDP LPAQPIDKLV TFAPADAVER ILDVLSAAGA GAIGAYSRCA
WTTDGIGTFR PNPGAHPTIG TIGRIETVPE VRVEMVLPRA RRDAVIAALL AAHPYEEPAY
DVIPLAERPG RAGTGRIGRL DQPESLADFV DRVRAALPAT PGGGRYAGDP DRLVHIVAVC
GGAGDGYLQT AAGAGADVYV TADLRHHPAS EITAETGIAL VDMPHWATEW PWLPDAAARL
REALGAAGFT VNIEVSTLVT DPWDGRIPGG GSR