Gene Acel_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0892 
Symbol 
ID4485724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp983373 
End bp984548 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content66% 
IMG OID639729667 
ProductLacI family transcription regulator 
Protein accessionYP_872651 
Protein GI117928100 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC GGTTGTTCAC CCGGATAATG AGACTCATGA CCGTGCCCCG CCTCCGCGAT 
GTCGCGCGAT TGGCCGGCGT CCATGCCGCC ACCGCATCGC GGGCGCTCAA TCCCGCCACC
CGCTCGATGG TGAGCGCGGA GACGGCGCAA CGGGTCCTCG AAGCGGCCGC GCAGCTCGGC
TACGTCGCCA ACCCGATCGC GAGAAGTCTG AAAACGAACC GCACGAATTC GATCGGCGTT
GTCATCCCTG ACCTGACGAA CCTCCTGTTT CCACCGATTG TGCGCGGCAT CGACGACGTG
CTGAGCCCTC TCGGGTACAG CCTCTTGCTT GTCAACACAG ACAACGACAA GGAACGCGAG
GCCGCTCACA TCGCGTCGCT GCGCGCCCGC CAGGTCGACG GACTCATTCT GGCGACCGCA
CTCTTGGAGG ACCCGCTTCT CCAGCGGCTG GGGGAGCAGC GGGTGCCGCT GGTCCTCATC
AACCGGCGAA TGAACACCCC CGGCTTCCCG TCAGTGACCG GAGATGACGC GGGCGGCGTG
TACCTCGCGG TGCATCACCT GGTGACGCTC GGTCATCGCC GCATCGCACA TCTCGCCGGC
CCGCAGCACA CGTCGACTGG TCAATTCCGG CTGCGCGCCT ACCGGCAAGC GCTGCAGGAC
CTTGGCTTGC CGCACGATGA CGACCTCGTT GCCCACTGCA GCGCGTGGAC CGAAGCGGAG
GGCGCCCGCG GCCTTGCCGA ACTCCTTGAT CGCGGCGTGG AATTCACCGC CGTCCTGGCC
GGCAACGACC TCCTGGCGCT CGGGTGTTAC GACCTCATGC GCGAGCGCGG CATTCACTGC
CCTGACGAGC TCAGCATCGT CGGCTTCAAC GACATGCCCA TCGTTGACAA GCTTCAGCCC
GCCCTTACCA CGGTGCGCAT TCCGCATTAT CGGGTCGGGT CCGAGGCGGC CCACATGCTC
CTCGAACGCC TTCACAAGCC CGATACGCCC GCGAAATCGA TCCTTCTCCC GTTGGAGCTT
GTCGTCCGGG GCTCGACTGC TCCGCCGGCC TCTTCTCGTC GGCCGGGGGG CGCCAGGCAA
AGCGGTGAGA CGACGCTTCG TGCTCCCGCC ACGCAGGACC GGCCCGACAG CGTATCCCCG
AGCCGACCCC ACTCTCCGAT TCTGACCGAG CTCTAG
 
Protein sequence
MDNRLFTRIM RLMTVPRLRD VARLAGVHAA TASRALNPAT RSMVSAETAQ RVLEAAAQLG 
YVANPIARSL KTNRTNSIGV VIPDLTNLLF PPIVRGIDDV LSPLGYSLLL VNTDNDKERE
AAHIASLRAR QVDGLILATA LLEDPLLQRL GEQRVPLVLI NRRMNTPGFP SVTGDDAGGV
YLAVHHLVTL GHRRIAHLAG PQHTSTGQFR LRAYRQALQD LGLPHDDDLV AHCSAWTEAE
GARGLAELLD RGVEFTAVLA GNDLLALGCY DLMRERGIHC PDELSIVGFN DMPIVDKLQP
ALTTVRIPHY RVGSEAAHML LERLHKPDTP AKSILLPLEL VVRGSTAPPA SSRRPGGARQ
SGETTLRAPA TQDRPDSVSP SRPHSPILTE L