Gene Acel_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0436 
Symbol 
ID4485671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp467127 
End bp467981 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID639729203 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_872196 
Protein GI117927645 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTAG CGACGGCACC TGCCCCCGCC GGACATCGTC GTCGCCCTCG GCTCACGGTC 
GGACGGGTGA TACTCGTCCT CCTCATGACC GCGGTCACCG TCGTCATGCT CTATCCGTTC
GGCTTCATGG TGAACAACTC GTTCAAAACG CAGCAACAAT TCGATGGCGC GGTCAGCGGC
CACTCGCTCT CCTCGTGGAT GCGCCTTCCG AAAGTCATTC CGGTCTGGCG GGAAATCATC
AATTCCACCA TCGTCTGTGC GGCCGCGATC GCCATCATTC TTGCGGTCAG CACCATCGCC
GGTTTCGCCT TCGCGAAGCT GCGCTACCGG GCGTCGGTGC TTGTCTTCAT CGCCATCATC
GCGGCCATGC TCATTCCGGT TCAATCCATC ATCATCCCGG CGTACGTCAA TTTCTCCAAG
GCACACCTGC TCACCGGGTA CTGGGGTGCC GTGCTCGTGT ACGCCGCGCT TGGCACGCCG
TTCGCCACGT TCCTCATGAC CACCTTTTAC CGTGGTCTGC CGGATGACCT GGTCGACGCG
GCCATCGTCG ATGGCTTGGG GTATTGGGGT GCGTTCGTGC GGGTCGCGCT GCCGATGGCG
CTCCCGGCAA TCGTTACGGT GACCGTCCTG CAGTTCATCC AAATCTGGGA CGACCTGCTC
GTCGGACTGC TGTTCTTACA AAACCCGAGT GACCGCACGA TTACCGTCGG GCTCGGCGTT
CTTGCCTCTG GTCGCACCAC AGACATTCCG GTGCTGATGG CTGGTTCTCT CATGAGTGCC
CTCCCTGCGA TCCTTGTCTA CGTCGTTTTC CAACGGCAAC TCGTGAGCGG ACTTACCGCC
GGGATGGGCA AATAG
 
Protein sequence
MSVATAPAPA GHRRRPRLTV GRVILVLLMT AVTVVMLYPF GFMVNNSFKT QQQFDGAVSG 
HSLSSWMRLP KVIPVWREII NSTIVCAAAI AIILAVSTIA GFAFAKLRYR ASVLVFIAII
AAMLIPVQSI IIPAYVNFSK AHLLTGYWGA VLVYAALGTP FATFLMTTFY RGLPDDLVDA
AIVDGLGYWG AFVRVALPMA LPAIVTVTVL QFIQIWDDLL VGLLFLQNPS DRTITVGLGV
LASGRTTDIP VLMAGSLMSA LPAILVYVVF QRQLVSGLTA GMGK