Gene Acel_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0425 
Symbol 
ID4485660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp452476 
End bp453378 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID639729192 
Productputative ribonuclease BN 
Protein accessionYP_872185 
Protein GI117927634 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.250516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.726297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACG AGAAGGCCGC CCGGCCTCGG GTTCTGGTGG GCCGGATCCG GAGTGCGTAT 
GACCGGCTTC CGGCGGGTGT GCGGATTTTC GGCGGTGCGG TTCGTGAGTT CAGCGACCAT
CGGTGCACCC TGCTCGCGGC AGCGCTGGCG TATCACGTGC TTTTCTCGTT CTTTCCACTC
GCCCTGGTGG CGGTGGGAAT CGTCGGCTTG GTCAGTAGTG ACCCTGCGGT GCGGAACGAG
GTGGCCACTC GGATCGTCGG CATCGTGCCG CTGAACACCG CCGGCCGGGA TCAATTGGCG
AATCTGTTGA CCTCCATCGC CGGCGCCCGC GGCGCGATCG GGTTTGTCGG TCTGGCGGGT
TTGTGGTGGT CGGCCAGCGG TGTGATGGGC GCGCTCCGGG GCGGGCTGAA TCAGGCGTTC
GACGTGACGG CCAAACGTCG ATTCTGGCGA GCGAAATTCC TGGACCTGGT CTTGGTGCTC
GGGGCCGTGG TCGTGGTCGG TGTGTCGTTC GGGGTGACGA TTCTGGTCGG CATTTTCCAG
CACATTGCGC ATCGCTTGCC GGGTGTGCTT GCGGACGCGG GTAGCTGGTT GGTCGATACC
GGCGGCCTTG GCATCGCCTT GCTGTTCATC TTCACGATGT GTCTGTTGCT CTACCGCTAC
GTACCGGTTC AGTCGTCGCG GATCGTGGAT CTGTGGCCCG GCGCGCTGGT CGCCGCCGTC
GGTCTGGAGG CGCTGCAGTA CGGGTTTGCT TTCTATCTCT CGAACTTCGG TCACTACAAC
CGGGTGTACG GGACGCTCGG CGGAATCGTC GCGTTCCTCT TCTTCGTGTA CGTCGCCGGT
GCGGTGTTCT TCTTCGGCGC GGAGGTTGCC GACGGGTACG CCCGCTACCG GCTCCGGCGG
TAG
 
Protein sequence
MVDEKAARPR VLVGRIRSAY DRLPAGVRIF GGAVREFSDH RCTLLAAALA YHVLFSFFPL 
ALVAVGIVGL VSSDPAVRNE VATRIVGIVP LNTAGRDQLA NLLTSIAGAR GAIGFVGLAG
LWWSASGVMG ALRGGLNQAF DVTAKRRFWR AKFLDLVLVL GAVVVVGVSF GVTILVGIFQ
HIAHRLPGVL ADAGSWLVDT GGLGIALLFI FTMCLLLYRY VPVQSSRIVD LWPGALVAAV
GLEALQYGFA FYLSNFGHYN RVYGTLGGIV AFLFFVYVAG AVFFFGAEVA DGYARYRLRR