Gene Acel_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0409 
Symbol 
ID4485967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp425655 
End bp426875 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content67% 
IMG OID639729176 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_872169 
Protein GI117927618 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTA GCATCGAACC GTCGGAGGTG GCCATGGACC CGGGGAGCGG ACCGTTTCTC 
CTGCCTGCCG AGTACGCGGC GGTCCGGGAC GCCGTCCGGC GGCTTGCCGA GGAGCGAATC
GCGCCGCGCG CTGCGGAGAT CGACCGTACC GGGGAATTCC CCTGGGACGT CCATGACGTG
TTGGCCCGTT CCGGTTTCCA TGCGCCGCGC ATCCCCGAGC AGTACGGCGG AAGCGGAGCG
GACGCGTTGG CGACCGCCGT CATCATCGAG GAAATCGCGC GGGTCTGTGC GGCGTCCTCG
CTGATTCCCG CGGTCAACAC GCTCGGCACC CTGCCGTTGC TGCTCGCCGG GGCGCATGAG
CTCTGCGCAC GTTATTTGCC GCTCGTCGCC AAGGGCGACG CCATGTTCTC GTATGCGCTG
AGCGAGCCGG AGGCGGGAAG CGATGCCGCC GCGATGACGA CGCGGGCGGT GCGTGACGGT
GAGTGGTGGG TGCTTGACGG CGTCAAACGG TGGATCAGCA ACGCCGGGGA ATCCCGTTTC
TACACCGTCT TCGCGGTCAC CGATCCCGAC GCTGGAACCC ACGGCATCTC GGCCTTTGTC
GTGGAAGCGG ACGATCCGGG GCTCTCGTTT GGCCCTAAGG AGCGCAAGCT CGGCATCCGT
GGTTCGCCGA CCCGGGAGAT GTCCTTCGCC GGCTGTCGTA TCCCCGAGTG GCGGATCATC
GGTGCGCCGG GGGACGGTTT CTCCCTTGCG ATGCGCACGC TCGACCACAC CCGGGTGACC
ATTGCCGCGC AGGCCGTCGG CATCGCGCAA GGGGCGTTGG ATGCAGCCGT CGGCTATACG
AGCCGCCGGG AGCAGTTCGG TCAGCCGGTC GCGGAATTCC AAGGCGTGCG GTTCACCCTT
GCCGACATGG CCATGCGTAT TGAGGCGGCG CGGGCGCTCA CCTATGTTGC CGCGGCTCAC
TCCGAACGGG GAAACGGCGA CCTCGGATAT TTCGGCGCCG CGGCGAAATG TTTTGCCTCC
GACGTCGCGA TGGCCGTCAC GACGGACGCC GTCCAACTCT TCGGCGGCTA CGGCTATACC
CAGGACTACC CGGTCGAACG GATGATGCGG GACGCGAAAA TCACCCAGAT TTACGAGGGG
ACCAATCAGA TCCAGCGGGT TGTGATCGGT CGTGAGGTGC TCCGCCGGGC CGCCTCGGGG
TCCAGCGGTC CCGTGCGATG A
 
Protein sequence
MRRSIEPSEV AMDPGSGPFL LPAEYAAVRD AVRRLAEERI APRAAEIDRT GEFPWDVHDV 
LARSGFHAPR IPEQYGGSGA DALATAVIIE EIARVCAASS LIPAVNTLGT LPLLLAGAHE
LCARYLPLVA KGDAMFSYAL SEPEAGSDAA AMTTRAVRDG EWWVLDGVKR WISNAGESRF
YTVFAVTDPD AGTHGISAFV VEADDPGLSF GPKERKLGIR GSPTREMSFA GCRIPEWRII
GAPGDGFSLA MRTLDHTRVT IAAQAVGIAQ GALDAAVGYT SRREQFGQPV AEFQGVRFTL
ADMAMRIEAA RALTYVAAAH SERGNGDLGY FGAAAKCFAS DVAMAVTTDA VQLFGGYGYT
QDYPVERMMR DAKITQIYEG TNQIQRVVIG REVLRRAASG SSGPVR