Gene Acel_0341 details

Gene Information

• Locus tag: Acel_0341
• Symbol: rplM
• ID: 4486409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidothermus cellulolyticus 11B
• Kingdom: Bacteria
• Replicon accession: NC_008578
• Strand: +
• Start bp: 351476
• End bp: 351919
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639729108
• Product: 50S ribosomal protein L13
• Protein accession: YP_872101
• Protein GI: 161936268
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type; [TIGR01077] ribosomal protein L13, archaeal/eukaryotic

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0522563
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.00384234
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGCGCACGT TCACTCCGCG ACCAGGTGAG ATCACCCGGC GTTGGCACGT CATCGACGCC 
GACGGCGTCG TGCTGGGCCG CTTGGCTGCC CAGGTCGCCC GCCTGCTTCG CGGCAAGCAC 
AAGCCGATTT TTGCTCCGCA CGTGGATACC GGCGATTTTG TCATCGTCGT CAACGCGGAC 
AAAGTCGTGC TCACCGGGCG CAAACTGGAC CAGAAAATTG CTTACCGGCA CTCGGGTTAT 
CCCGGCGGCC TTAAGGCGAC GCCGTACCGC AAGCTCCTCG CCGAGCACCC TGAGCGGGTC 
ATCGAGAAGG CGGTGCGGGG CATGCTGCCG CACAACAGCT TGGGCCGGCG CATGGCCAAG 
AAGCTCAAGG TCTATGCCGG ACCGGAGCAT CCGCATCGCG CGCAGCAGCC CACACCTTTC 
GAGATCACCC AAGTCCGGCA GTAG 

 

Protein sequence

MRTFTPRPGE ITRRWHVIDA DGVVLGRLAA QVARLLRGKH KPIFAPHVDT GDFVIVVNAD 
KVVLTGRKLD QKIAYRHSGY PGGLKATPYR KLLAEHPERV IEKAVRGMLP HNSLGRRMAK 
KLKVYAGPEH PHRAQQPTPF EITQVRQ