| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0336 |
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| Symbol | |
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| ID | 4486404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 346960 |
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| End bp | 347853 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639729103 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_872096 |
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| Protein GI | 117927545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0521282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000493402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGACGGCAC TGCCTGACGG CCGGGACGAC GCCGGCCGAG CGGACGCCGC GACAGCGCGA
CTGCGCATCG ACCTCGGATA CGACGGGACC GATTTCGCAG GCTTTGCCCG TCAACCGGGA
CTGCGCACCG TCCAAGCGGA GGTCGAGCGC GCGCTCGCCG TCGTCCTGCG ACTGCCGGAG
CCGCCGCCGG TCACGGCGGC AGGCCGGACG GACGCCGGGG TGCACGCGCG CGGGCAAGTG
CTGCACGTCG ACGTCCCCAT CGATGCCCTC CGGGTGGTCG GCGCAGCCGA AACCGGCGCC
GCTGACGCTG TGGCGCAGCT GGCCGCGCGG CTGAACGGCG TCCTCCCTGA CGACATTGCC
GTGCACGCTG TCGGCCTCGC GCCTCCCGGT TTCGACGCCC GGTTCTCGGC ACTCGCCCGC
CGGTACAGCT ACCGTGTTGC GGACCGGCGC TGGGATCCGC TGCGCCGCCG CGACACGCTC
CGATGGCCGC GCCCGCTCGA CGAGACCGCG ATGAACGCCG CCGGCGCGGC ACTGCTCGGT
GAACATGATT TCGCCGCCTT CTGCCGCCGT CGGGAGAATG CGACGACGAT CCGGCGCTTG
CTCCGGTTCG AGTGGCTCCG CGACGGCGAC GGCGTGCTGG TGGCACAGGT CGAGGCCGAC
GCATTCTGCC ACTCGATGGT GCGGGCGCTG GTCGGCGCCG TGCTTGCCGT CGGTGCCGGA
CGGCGTCCGG TTGGCTGGCC GGCCGAGGTG CTAGCCGCGC GGGCCCGGGA CCCTGCGGTG
ACGGTGGTCC CGCCGCACGG GCTCACGCTG GAGGAGGTCT GCTATCCCCC GGTTGACCTG
CTTGCGGCGC GCGCAGCCCA GACCCGGCGG CGTCGGGATG TCGCGTCCGG CTGA
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| Protein sequence | MTALPDGRDD AGRADAATAR LRIDLGYDGT DFAGFARQPG LRTVQAEVER ALAVVLRLPE
PPPVTAAGRT DAGVHARGQV LHVDVPIDAL RVVGAAETGA ADAVAQLAAR LNGVLPDDIA
VHAVGLAPPG FDARFSALAR RYSYRVADRR WDPLRRRDTL RWPRPLDETA MNAAGAALLG
EHDFAAFCRR RENATTIRRL LRFEWLRDGD GVLVAQVEAD AFCHSMVRAL VGAVLAVGAG
RRPVGWPAEV LAARARDPAV TVVPPHGLTL EEVCYPPVDL LAARAAQTRR RRDVASG
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