| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0331 |
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| Symbol | rpsM |
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| ID | 4486117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 343602 |
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| End bp | 343982 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639729098 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_872091 |
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| Protein GI | 117927540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.13028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000403081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGGCCCGTC TCGTCGGTGT CGATCTTCCG CGCGACAAGC GGCTGGAGGT CGCGCTCACG
TACATCTATG GCATCGGTCG TACCCGCGCG CTGGAGACGC TCGCTGCCAC CGGCATCAGC
CCCGATCTGC GGGTCCGGGA TCTGACGGAC GACGATCTGC TGAAGCTCCG GGAATGGATC
GAGGCAAATT ACCGGGTCGA GGGGGACTTG CGCCGCGAAG TCGCCGCGGA CATTCGCCGC
AAGATTGAGA TCGGCTGCTA CCAGGGGATT CGTCATCGCC GCGGCCTTCC GGTGCGCGGC
CAGCGCACGC ACACCAACGC CCGCACCCGG AAGGGTCCCC GCAAGACTGT CGCTGGGAAG
AAGAAGCCCG GCAAGAAGTA A
|
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| Protein sequence | MARLVGVDLP RDKRLEVALT YIYGIGRTRA LETLAATGIS PDLRVRDLTD DDLLKLREWI
EANYRVEGDL RREVAADIRR KIEIGCYQGI RHRRGLPVRG QRTHTNARTR KGPRKTVAGK
KKPGKK
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