Gene Acel_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0320 
Symbol 
ID4486106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp337370 
End bp337774 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID639729087 
ProductSSU ribosomal protein S8P 
Protein accessionYP_872080 
Protein GI117927529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00355814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGACCG ATCCGATCGC GGACATGCTG ACGCGGGTCC GCAACGCCAA TTCGGCGTAC 
CACGACACCG TCGTGATCCC CTACTCAAAG ATCAAGGCGA ATATCGCGGA GATTCTCCAG
CGCGAGGGGT ACATCGCCGG TTACCGGGTT GACCCGGTGC CTGGGCACGC GACGGCGAAG
AACCTCGTGA TCACGCTCAA ATATGGGCCG AACCGCGAGC GGTCAATTTC CGGCGTGCGC
CGGGTCAGCA AGCCGGGGTT GCGGGTGTAC GCCAAGGCCG AGAACCTGCC TCGAGTGCTC
GGCGGGCTCG GTATCGCGAT CATCTCGACG TCTGCCGGTC TCCTCACCGA CCGCCAATGC
GCGAAGCGGC GCATCGGCGG CGAGGTGCTG GCGTACGTGT GGTAG
 
Protein sequence
MMTDPIADML TRVRNANSAY HDTVVIPYSK IKANIAEILQ REGYIAGYRV DPVPGHATAK 
NLVITLKYGP NRERSISGVR RVSKPGLRVY AKAENLPRVL GGLGIAIIST SAGLLTDRQC
AKRRIGGEVL AYVW