Gene Acel_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0307 
Symbol 
ID4486461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp330828 
End bp331490 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID639729074 
Product50S ribosomal protein L4P 
Protein accessionYP_872067 
Protein GI117927516 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00224676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCG TGACCGTCGC CGGCACCGAC CGGACCGTCG AACTACCGGC GGACGTGTTC 
GACGTCCAGG TCAACGTGCC GCTCATTCAT CAAGTCGTCG TTGCGCAGCT CGCCGCCGCC
CGCCAGGGCA CCCACAAGAC GCGGACCCGC GGCGAGGTCT CCGGCGGCGG GAAGAAGCCG
TACCGGCAGA AGGGCACGGG CCGGGCCCGC CAAGGCTCCA TCCGCGCGCC GCAGTTCACC
GGCGGTGGTG TGGTGCACGG CCCCATGCCA CGCCACTACG ACCAGCGCAC CCCGAAGAAG
ATGAAGGCGG CCGCCCTGCG CGGCGCCCTC ACCGACCGGG CGCGCGCTGG ACGAATTCAC
GTACTGCCGC GCATCGTCGA CGGGGAGGCG CCGTCCACTA AGCAAGCGCT CGAGGCGCTC
CGGACGGCGC TGGGCACCGA GCGGCGTCGG GTCCTCGTCG TCCTGGATCG CGGAGACGAG
ACCGGCTGGA AGAGCCTGCG CAACATCCCG GACGTGCACC TGCTGGTGGC GGATCAGCTG
AACGCGTACG ACGTCCTGTC CAGTGACGAC GTCGTCTTCA CCGAGCAGGC ACTGAGCGAG
TTCCTCGGAC GTGGGGGCGA CCGGACGGCG GAAGGAGACG GCGATGAGCA GCGATCCGCG
TGA
 
Protein sequence
MTTVTVAGTD RTVELPADVF DVQVNVPLIH QVVVAQLAAA RQGTHKTRTR GEVSGGGKKP 
YRQKGTGRAR QGSIRAPQFT GGGVVHGPMP RHYDQRTPKK MKAAALRGAL TDRARAGRIH
VLPRIVDGEA PSTKQALEAL RTALGTERRR VLVVLDRGDE TGWKSLRNIP DVHLLVADQL
NAYDVLSSDD VVFTEQALSE FLGRGGDRTA EGDGDEQRSA