Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0216 |
Symbol | lysS |
ID | 4486074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 230220 |
End bp | 231725 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639728979 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_871976 |
Protein GI | 117927425 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.404886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.127983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAGTC ACAGCCAACC ACTCGAGCCG GACGATTTCG ACGTCCCGGA GCAGTTTCGG GTCCGCCGGG AAAAGCTTGC GCGGATCCGC GCGGAGGGCC TGGATCCGTA TCCGGTCGGC TTTCCCCGGA CCGCCTTTAT TGCAGAGATT CGCGCGGCGT ACGGCGATCT GCCGCCCGAT ACCTTCACCG GTCAACACGC CTCGATCGCC GGGCGGTTGA TGCTGTCCCG GATCGGCGGC AAACTCTGCT TCGGCGTGCT GCGGGATGGT TCCGGTGACC TGCAAATAAT GCTCTCGGCA CAGAAGGTGG GTGACCGCGC GCTGGCGCTC TGGAAGAGCC TTGTCGATCT CGGCGATCAC ATCGGCGTGC ACGGTGAGAT CATCACCTCG CGGAGCGGCG AGTTGTCGAT TCTCGCCGAC TCGTGGTCGT TCACGAGCAA GGCGCTCCGG CCGTTGCCGG AGAAGCACAA GGGTTTGACC GATCCCGAGG CGCGGATTCG CCGTCGGTAC GTCGATCTCA TCGTGAATTC CCGGGCGCGG TCGATGGTCC ACATCCGTGC CGCCGTGTTG CGCTCCCTCC GGGACACTCT GAGCCGGCGC GGATACCTCG AGGTCGAGAC CCCTGTCCTC CAGCTGGTGC ACGGAGGCGC GGCTGCGCGG CCGTTCCGCA CCCATCTCAA TGCCTTCGAC CTGCCCTTGT ATCTGCGGAT CGCCCTCGAG CTGCCGCTCA AACGCCTGGT CGTCGGCGGC TTGGAACGCG TCTACGAAAT CGGCCGGGTC TTTCGCAACG AAGGGGTCGA TTCGTCGCAC AGCCCGGAAT TCACCGAACT GGAGGCGTAC GAGGCCTACG GTGATTACGA CACGATGGCT GACCTCGTTC GTGAGCTCGT ACTTGACGCG GCGAAGGCAA TCGACGCGGT TCAGGTGCTG GGTTCATCCG GTGATGTCAT CGATCTGGCC GGTCCGTGGC GCACCGTCAC GGTGCATCAG GCGGTCTCCG AGGCCGTCGG TGAAGAAATC ACCGTCGACA CCCCGGCTGC GGTGCTCCAT CAGATCGCGG CGCGATACAA CGTACCGGTT CCTCCGGCGG CGGAGCATGG CGAGGTTGTC TGCGAGCTCT TCGAGAAGGT CGCCCAGCCG GCGATCGTCC AGCCGACATT CGTTCGTGAC TTTCCGGCTT CCGTTCGCCC ATTGGCCCGG CCGCATCGGA CGGATCCTCG GCTGGCCGAA GCGTGGGATC TCATCATCAA CGGCATAGAG CTGGCCCCGG CCTACTCCGA GCTTGTCGAT CCGGTCGAGC AGCGCCGGCG GTTGACCGAG CAGTCGGTCC GTGCCGCCGG TGGAGATCCG GAGGCAATGC AATTGGACGA GGATTTCCTG CAGGCCCTGG AGTACGGCGC GCCGCCGATG GGCGGGTTGG GGCTTGGGGT GGACCGCCTG CTGATGCTGC TCACCGGATC GGGTATCCGG GACGTCATCC TCTTCCCCCT CGTCCGGCCC GAATAG
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Protein sequence | MTSHSQPLEP DDFDVPEQFR VRREKLARIR AEGLDPYPVG FPRTAFIAEI RAAYGDLPPD TFTGQHASIA GRLMLSRIGG KLCFGVLRDG SGDLQIMLSA QKVGDRALAL WKSLVDLGDH IGVHGEIITS RSGELSILAD SWSFTSKALR PLPEKHKGLT DPEARIRRRY VDLIVNSRAR SMVHIRAAVL RSLRDTLSRR GYLEVETPVL QLVHGGAAAR PFRTHLNAFD LPLYLRIALE LPLKRLVVGG LERVYEIGRV FRNEGVDSSH SPEFTELEAY EAYGDYDTMA DLVRELVLDA AKAIDAVQVL GSSGDVIDLA GPWRTVTVHQ AVSEAVGEEI TVDTPAAVLH QIAARYNVPV PPAAEHGEVV CELFEKVAQP AIVQPTFVRD FPASVRPLAR PHRTDPRLAE AWDLIINGIE LAPAYSELVD PVEQRRRLTE QSVRAAGGDP EAMQLDEDFL QALEYGAPPM GGLGLGVDRL LMLLTGSGIR DVILFPLVRP E
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