Gene Acel_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0057 
Symbol 
ID4484753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp62540 
End bp63073 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID639728819 
ProductRNA polymerase sigma factor SigL 
Protein accessionYP_871819 
Protein GI117927268 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG CCGGAGCGGA CGAGGCGCTG GTCCGTGCCC TGTACGAGCA GCACGGACGG 
GTGCTCTTCG GCTACGTGCT CCGGCTCGTT GACGGCGATC GTGGCCGAGC CGAGGACATC
GTGCAGGAAA CGATCATCCG TGCGTGGCGC CATCCGGAAG CCCTCGCCAG GGATCCGCAC
GCCATCCGGC CATGGCTCTT CACAGTGGCG AGGAACCTCG TCGTCGACGC GCATCGCGCC
GTGCGGGCTC GTCCGCCCGA GGCCGGTCCG GAGGGGCTCG GCGTGGTGGC GGCGGAGGAT
GACGTAGTCG CCGCCGTCGA CCGTGCGCTC GAGGCGTGGC AGGTGGCCGA CGCCATCAAC
GCGCTCAGCC CGGACCACCG CCGGGTGCTC ATCGAGACCT ACTACCGCGG CCGATCCGTC
GCCGAAGCTG CGGCGGTACT CGGAATTCCC CCGGGAACGG TGAAATCGCG GACGTACTAC
GCCCTCCGCG CCCTCCGGCT CATTTTGGAA GAGAGAGGGG TGACCGAACG GTGA
 
Protein sequence
MTRAGADEAL VRALYEQHGR VLFGYVLRLV DGDRGRAEDI VQETIIRAWR HPEALARDPH 
AIRPWLFTVA RNLVVDAHRA VRARPPEAGP EGLGVVAAED DVVAAVDRAL EAWQVADAIN
ALSPDHRRVL IETYYRGRSV AEAAAVLGIP PGTVKSRTYY ALRALRLILE ERGVTER