Gene Acel_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0051 
Symbol 
ID4484747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp56314 
End bp57081 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID639728813 
ProductApbE family lipoprotein 
Protein accessionYP_871813 
Protein GI117927262 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.252526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGG AACTCACATC GGTCGTCCAT GTGGAGCACG TCATGGGCAC GACCGTGAGT 
TTCGACGTGC GCACCACGCC GGACGACGTA GACCACGCGC GGCGGGTGAT TGCCGCAGCC
GTGCACATCC TGCACACTGC CGATGCGGTG TTCAGCACGT ATCGCCCCGA CAGCGACATT
TCCCGTCTGA ACCGCGGCGA GTTGCGGCTT GCCGCGTGTC ATCCGGACGT CGCCCGCGTG
CTCGACTTGT GTGCCTGGTT TGAGGCGAAG ACCGACGGCT ATTTCACGGC GCGATATGAC
GGTTCGATCG ACCCTACCGG CCTGGTGAAA GGTTGGGCCG TTGACCGCGC GGCGCAGCAT
ATCGCCGATG CGGGATATCA GCACGTCCTG GTCAACGGCG GCGGCGACAT TGCGGCGGTG
GGCGGCCGGG CCCCTGGTCT GCCGTGGCGG GTGGGCATCG CCCATCCCTT CCGCTCGGAC
GTCCTGCTCG CCACCGTGGA ACTCTTCACC GGCGGTGTCG CCACCTCGGG TACCACATGC
CGCGGAGCAC ATGTCATCAA TCCGCGGACC GGTTCACCCG CCACCGAATG GGCAAGCGTC
ACCGTCAGCG GCCCGGACCT TGTCAGTGCG GACGTTTACG CGACCGCAGC GTTGGCAAGG
GGGCGAAGCG CCCTCACCTG GCTTTCGGAA CTGCCCGGAT TCCGGTACTG GGCGGTTTCG
GCGGACGGCG CCGCCTGGCA GTCTCCGCCT CGGAGTGCAG TGCGCTGA
 
Protein sequence
MPAELTSVVH VEHVMGTTVS FDVRTTPDDV DHARRVIAAA VHILHTADAV FSTYRPDSDI 
SRLNRGELRL AACHPDVARV LDLCAWFEAK TDGYFTARYD GSIDPTGLVK GWAVDRAAQH
IADAGYQHVL VNGGGDIAAV GGRAPGLPWR VGIAHPFRSD VLLATVELFT GGVATSGTTC
RGAHVINPRT GSPATEWASV TVSGPDLVSA DVYATAALAR GRSALTWLSE LPGFRYWAVS
ADGAAWQSPP RSAVR