Gene Acel_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0048 
Symbol 
ID4484744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp53029 
End bp54246 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID639728810 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_871810 
Protein GI117927259 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.396103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC GCATCGTCGA TGCCAAGGTC ATCGTGACCT GCCCGGGCCG TAATTTCGTC 
ACGCTGAAAC TCACCACCGC GGACGGCGTC ACCGGTCTCG GCGACGCGAC GCTCAACGGA
CGCGAGCTTG CGGTCGCCAC GTATCTTCAG GAGTACGTCT GCCCCCTGCT CCTCGGACGC
GACCCGGCGC AGATCAACGA CACCTGGCAG TACCTGTACC GGGGGGCCTA CTGGCGCCGC
GGCCCGGTAA CGATGGCGTC CATCGCCGCC GTTGACATGG CCTTATGGGA CATCAAGGCC
AAGACCGCTG GAATGCCTCT CTACCAGTTG CTCGGCGGCC GGGCCCGCGA TGGTGTGACC
GTCTACGGTC ACGCGAACGG CCGGGACATT CCGGAAGTCC TTGACGAAGT CGCCGCTTTC
CTTGAACGCG GTTACAAGGC CGTCCGGGTC CAGGTGGGCA TTCCCGGCCT GGGCGCGGTG
TACGGCGTGA GCAAGGACCG CACGTTCTAC GAACCGGCCA CCGGCACCGA CCGGCCGGAG
GAGACCCGCT GGTCAACCGA GGCGTATCTG CATTTCGTGC CGCAGCTCTT CGCCGCGGTC
CGTGACCGGT TCGGCTTCGA TTTCCACCTC CTGCACGACG CCCACCACCG CTTGACGCCG
ACCGAGGCGG CAAAATTCGG CAAGCGGATT GAAGAGTACG ACCTCTTCTG GTTGGAGGAT
CCGACCCCTG CTGAGGCGCA GGACGCCTTC CGCATCATCA AGCAGCACAC GACGACCCCG
ATCGCGGTCG GTGAAGTCTT CAACACGATC TGGGATTGCC ACCAGCTCAT TAGCGAGCGA
CTCATTGATT TCATCCGGGT GACGCCGGTG CACGCCGGCG GCGTGAGTCA CGTGAAGCGC
ATCGTCGAAT TCGCCGACCT CTACGGCGTG CGAAGCGGTT TCCACGGTGC GACGGACATG
TCACCGGTCT GTATGGCCGC CGCGATCCAC CTCGACATGT CGATAGCAAA CTTCGGACTG
CAGGAGTACA TGCACCACAC CGAGGAGACC AACGCCGTTT TCCGCCATGC GTATTACTTT
GCCGACGGCT GCCTGCACCC CGGTGACGAA CCCGGTCTCG GTGTCACACT GGACGAAGAA
CTCGCGGCGA CGTTTCCGTA CCGACGCGCC TATCTGCCGG TGAACCGGCT TCTTGACGGC
ACGATGTTCC ACTGGTGA
 
Protein sequence
MSDRIVDAKV IVTCPGRNFV TLKLTTADGV TGLGDATLNG RELAVATYLQ EYVCPLLLGR 
DPAQINDTWQ YLYRGAYWRR GPVTMASIAA VDMALWDIKA KTAGMPLYQL LGGRARDGVT
VYGHANGRDI PEVLDEVAAF LERGYKAVRV QVGIPGLGAV YGVSKDRTFY EPATGTDRPE
ETRWSTEAYL HFVPQLFAAV RDRFGFDFHL LHDAHHRLTP TEAAKFGKRI EEYDLFWLED
PTPAEAQDAF RIIKQHTTTP IAVGEVFNTI WDCHQLISER LIDFIRVTPV HAGGVSHVKR
IVEFADLYGV RSGFHGATDM SPVCMAAAIH LDMSIANFGL QEYMHHTEET NAVFRHAYYF
ADGCLHPGDE PGLGVTLDEE LAATFPYRRA YLPVNRLLDG TMFHW