Gene Acel_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0034 
Symbol 
ID4484527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp38330 
End bp39067 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID639728794 
Producthypothetical protein 
Protein accessionYP_871796 
Protein GI117927245 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5602] Histone deacetylase complex, SIN3 component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC GAGCGCCGAC ACGTACGCCG GGCATGCTCG CCGCTACGTC CGCCAAGACC 
GTGGTCACGA TCGCCGGTCT CATCGCCGTG ACGACAGCGG CCACCGCCGG CGTCGTCCTC
GTTGGATCGC AAGCAATCAC CGACCATCGT GCAGCGCCAC CGGCAGCCGC CGGCTATCCG
GTCGGAAGCA ACGCGCCAAG CCCGGTGGTG GTGATTCCGC GCAGCCCGAC AACCACGGCC
GCACCGAACA GCGGGAACCC TCCTCCGCAG ACGCCGTCGG CGGTGCCGAC ACCGTCCCCG
TCACGCCCCG AGGCCCGACC GGCTGAGACT CCGACCCCCG CGCCACCAAG CGTTCCGAGC
CGGCCGACGC CCGGGACACA GGAGATCAAC TTCCCGATCG GTGGCTCGTC CGCCACACCG
ACGCCGTCGC CCGCGCCGCC GTCCGTCACA CCGACGCCGT CACCCGCCCC ACCGGCGACC
CAACCGCCGG TGAGCCAACC CGGCCGGCAA CCGGGTGCAC AGGCGGGCGC CCCGAAGGGA
CCCAAACATC CACACCGCGT TCACCAGCCT CAGCACACCA AGCGACACCC GCCGACGCCC
AGAGGACGTG ACCACGGCTG CACCGTCGGC AGCTGGTTCG GCCCGTGGAT TGCGGGACGA
GGCCATGGCC CCGCAGGATG CCCGCGCGCG CTAGGCCTTC GCAGACTCGC CGGCGGAGGA
CGGTTCCAGT CGCGATAG
 
Protein sequence
MKHRAPTRTP GMLAATSAKT VVTIAGLIAV TTAATAGVVL VGSQAITDHR AAPPAAAGYP 
VGSNAPSPVV VIPRSPTTTA APNSGNPPPQ TPSAVPTPSP SRPEARPAET PTPAPPSVPS
RPTPGTQEIN FPIGGSSATP TPSPAPPSVT PTPSPAPPAT QPPVSQPGRQ PGAQAGAPKG
PKHPHRVHQP QHTKRHPPTP RGRDHGCTVG SWFGPWIAGR GHGPAGCPRA LGLRRLAGGG
RFQSR