Gene Aboo_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1473 
Symbol 
ID8828439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1416665 
End bp1417813 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content40% 
IMG OID 
Productglycoside hydrolase family 5 
Protein accessionYP_003483841 
Protein GI289597145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATTGA CGATAAATCA TCATGGAGTG TGGATAATAC TAGTACTGCT CTTGGTGGTT 
GATATTAGCA TGTTTGGAGT TTATTCATCT CATTCCGTTT TCTCAAATGC TCGGATTGAG
AGTCTAAATG GCACAGAGCC GATAAATGCT ACAGAATACC AGAAATTGAT GGGGATAGGA
ATAAATGTTG ACTGGATGAC CTTTAAGAAG GTGAACACGC AATATTTCCA ATGGCGTGAA
CAAGGAGTCC ATGTACCCTC TTATTTTAAG GAGAGAGGTT TCTCTAATGT TCGCATAAGA
GTTAATCAAG ACCTCACCAC CAATCAGACT GCTATGGAGC AACTTACAGA TATTGTGAAT
GATTGTTTAG ATGCAGGATT GTATCCCATC ATAACCAATG TTGCAGATGA TTTGAGAGAT
TACCCTACAA ATATCAGCGT GCAACAACAC TTTGTGAAAT GGTGGGAAAC AGTGATAGAT
CATTTCAAAG GATATTCTTA TAATCTCTCC TACGATTTAC TGATAGAATC AAGTCATGAG
ATTAAGAATT ACCCAGATGT GCTTAACAAG GTCTACTATG AAATCATTCA TTATCTCCGC
CAAGAGGACC CATATAGAAT AGTATTTGTG ACCCCAGCCG GAGGATCCAA GCCTGACTAT
CTCCAAGATC TAAATGTTAC CAACAATGGT TATATTCTGG CAGAGTGGCA CATATATGCA
GGGGGTCCCT CTGAATCTGG TACGGATTGT GTATATAGTA AATCTTATAT TAATCAAACA
CTCTCGACCG CATTGAGCTG GACAAAAGAG ACGGGGATAC CCACATGGCA AGGTGCATGG
CGGTCAAATT GCTACCCTAA CGGAGGCACA GATGCAGAAT GTAATATGTC CCTCGAGATC
AATTTCACAA AAGCAATGGT CTCCGCATAT GCTGGCGCTA ATCTCCCCTA CGATGTTAAC
GCAGATACAA AATTTTTTGA TATATCAAAC TTGACCTGGT ACAAATTGCA AGAAGAAGCA
CTGGACATTA TACTACAGCA AAACGGTGCC GTGCCCGAGT TCAGTATGGA TTCACCATGG
GTAATCCTCG TCATCATAAT TTTAATCATT GCAGTTGTAT ATCCTAGATC TAAAAACTCT
AATTTTTAA
 
Protein sequence
MILTINHHGV WIILVLLLVV DISMFGVYSS HSVFSNARIE SLNGTEPINA TEYQKLMGIG 
INVDWMTFKK VNTQYFQWRE QGVHVPSYFK ERGFSNVRIR VNQDLTTNQT AMEQLTDIVN
DCLDAGLYPI ITNVADDLRD YPTNISVQQH FVKWWETVID HFKGYSYNLS YDLLIESSHE
IKNYPDVLNK VYYEIIHYLR QEDPYRIVFV TPAGGSKPDY LQDLNVTNNG YILAEWHIYA
GGPSESGTDC VYSKSYINQT LSTALSWTKE TGIPTWQGAW RSNCYPNGGT DAECNMSLEI
NFTKAMVSAY AGANLPYDVN ADTKFFDISN LTWYKLQEEA LDIILQQNGA VPEFSMDSPW
VILVIIILII AVVYPRSKNS NF