| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1443 |
|---|
| Symbol | |
|---|
| ID | 8828408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1378680 |
|---|
| End bp | 1379702 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003483812 |
|---|
| Protein GI | 289597116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTAA AGAAATACAA AAAATGGATG ATTATCTCTA TTGTCATTAG CGCCACATCC
TTGGCCATCA TCTATATGAT GAGTGCAACA AAGCAGGCAG AAGAAATAAT TTTAACTATT
CATCCATTGA TAATTTTAGT TGCTTTATTA TTTAATCTAT TCAGTTGGAT GGCTTGGGCT
CTGAGAATAA AAATACTGGC CTCCGCTCTA AATACAAAGG TTACATACTC TAAGGCTTTC
AAAATTGTTA TGGTAAGTCA TTTTATGGCA TCTGTCACTC CCTCATCCAT GGGCGGAGAA
CCAATGCGAA TATATATGCT CACCCAAGAC GAAATAGCTC AAGGTGATAC CAGTGTGGGA
AATGCAACCG CTCTAACCCT TGGAGAAAGA CTCATAGATT TCATATTCTT TGGGGTCACT
CTTCCAATTC TCTTGCTCTT AGTCGGACTA TCCGTGGATT TAACGGGAGT AAGATATCTC
TTAATCGGTT CAGGAGTATT ACTCGGTTTA CTGGGAATAT TAACATTCTA CATTGTCACA
CATCCACATA AATTCAATAA GCTTTCTAAA AAAGTCAACA AATTGTTAAA ATTCTTTATC
AAGGATAAGA GCAAGAGAAA AAGAATAATC CTAAAAATGG AGCAAGAATT TGGAGTTTTT
TCATCCGGAA TAATAAGCCT ATTTAAGCAT AAAAAATGGC ATCTTTTAGC AACTATTGCT
ACCACTGCTC TTATGTGGAG CTTTGGATTT ATGATTCCTT CCATAATTCT AATAGGTCTT
GGACTTCCAC CCATATGGCT TTTATCTTAC ACCTTTCAAA TGATTATAGT TCTGATCACA
ATGATTCCCA TATCTCCTGG TGGAAGTGGC CTTGCAGAAT TTTCAGCGTA TTTTCTCTAT
GGACAACAGG TACCCAAAGA ATTTTTGGGA CCCCTAATTG TTGTTTGGAG AATTTTAACA
TTTTATATGA ATTTGGGCGT TGGATTAGTT TACACCCTGC ACTACATAGC AAAAGGTAAA
TAA
|
|---|
| Protein sequence | MELKKYKKWM IISIVISATS LAIIYMMSAT KQAEEIILTI HPLIILVALL FNLFSWMAWA
LRIKILASAL NTKVTYSKAF KIVMVSHFMA SVTPSSMGGE PMRIYMLTQD EIAQGDTSVG
NATALTLGER LIDFIFFGVT LPILLLLVGL SVDLTGVRYL LIGSGVLLGL LGILTFYIVT
HPHKFNKLSK KVNKLLKFFI KDKSKRKRII LKMEQEFGVF SSGIISLFKH KKWHLLATIA
TTALMWSFGF MIPSIILIGL GLPPIWLLSY TFQMIIVLIT MIPISPGGSG LAEFSAYFLY
GQQVPKEFLG PLIVVWRILT FYMNLGVGLV YTLHYIAKGK
|
|---|
| |