| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1378 |
|---|
| Symbol | |
|---|
| ID | 8828340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1317236 |
|---|
| End bp | 1318084 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003483747 |
|---|
| Protein GI | 289597051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA AATTTAATCT TTACAAAGTT GTGAAGATAG GGTTAAAAGC GCTAAAGAGA
ACTAAAATTC CACTTTACTG GAGCAGATTT TCAAGGAAGG ACTACACTCT GCACCAGCAC
ATCATGCTGA TAGTGCTGGC GCAGTATGCA GGAAGCATAG AAAGAATGCT CCAGATTGTG
CGAGAAATGA GAAAGATAAA GAGGGTAATG AGATTGAAGA AAATCCCACA TAAAAGCACA
ATTTCAAGAG AGTTGAGAAG AATACCAGAA CTATGGATTC GCATAGTACT TAGAGAGATA
ATAAGAGCCT TAGGAATACC CAGCAAATTT GCAGTGGATT CCACAGGTAT TCAGATTTCT
TACCGCTCAT ATTACTACAC ACAGCGAATC GGAGAAGTAG GAAAAATAAG AGAAGGTCTG
AAATTGCATG CTGCTGTGGA TATCGATACA AAGCTCATTA CCAATGCAAT AGTTACAAAA
TGGCACACTA ACGATTCACC GTACCTCATT CCTCTTTTGG AGGAAGAGAG AGTAAAAGAA
GTGTATGCAG ATAAAGGCTA TGATTCTCTA CGTAACATAC GATTTGTTCT GAATAAAGGA
GGAACTCCAT ACATAGCAAT CCGTAATAAA GCAAGAAGAG GATTGCGAAG GAGATTGTTA
GAAAAGAGCA AATCTCCTGA CTGGAAAAAG AAGTATTCGC AAGAAGGGGG CAGAGCCCCC
TTTCTAAACC CCCAATCTGT GTTCCACTCA TTCAAAAGAA TTGTTGGCGA TTACATATTC
TCCCATTCTT TCTCTGTTGC TTCTAAACTC CTCCTATTTA AAGTTCTGGC TTATGATCTC
TATGTCTAA
|
|---|
| Protein sequence | MSRKFNLYKV VKIGLKALKR TKIPLYWSRF SRKDYTLHQH IMLIVLAQYA GSIERMLQIV
REMRKIKRVM RLKKIPHKST ISRELRRIPE LWIRIVLREI IRALGIPSKF AVDSTGIQIS
YRSYYYTQRI GEVGKIREGL KLHAAVDIDT KLITNAIVTK WHTNDSPYLI PLLEEERVKE
VYADKGYDSL RNIRFVLNKG GTPYIAIRNK ARRGLRRRLL EKSKSPDWKK KYSQEGGRAP
FLNPQSVFHS FKRIVGDYIF SHSFSVASKL LLFKVLAYDL YV
|
|---|
| |