Gene Aboo_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1296 
Symbol 
ID8828258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1242290 
End bp1243573 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content38% 
IMG OID 
Productproteinase inhibitor I4 serpin 
Protein accessionYP_003483666 
Protein GI289596970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00386806 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG GAAAATTATC TGCCGTGCTT ACTTTGATTA TAATCGCAGT CATTATAGGT 
GCATTTGTAT TTCAAGTGCT TATTGCTCCA AAGGAGAATT ATATTTCTAC TCCAAATATA
AACTTGCAAC CGCAGAACCT CAATTTAAGT TGGAATGATA GAGGGGTGAA TGAGGAGAAT
CTAAGAAATG TTGCCCTTGC ATCTGGTAAT TTTGGATTAG CTCTCTTCTC CCAAATATTT
AATGTGAGCA ATAACACTGT GATTTCGCCC CTTAGCATTT GGCTCGCATT AGCGATGCTC
TATGAAGGAG CAAGGGGAAA CACCGCGGAA GAAATGAGAA ATGTGATGTA TCTTCCGAGG
AATAGGACAA TATTGGAGGA AAATATACAT TGGTTTCTTG AGAATTTTGA AAATCACACA
GAAAATTATA CACTAAGCAT TGCAAACGCG CTATGGGCTC AAGAAGGTTT GGATATAAAT
AAGGACTATG TGCAAATTCT ACAAGATTAT TACAATGCTT ATTTTCAATA CTTGAATTTT
AGAAATGCAG AAAAAGCCAG GAACATAATA AATTCTTGGG TCGAGAATTA CACAAATGGA
AAGATAAAGA ATCTACTTCC TCAGGGAAGC ATAACCCCAG AAACTATTGC CGTGTTAACC
AATGCCATCT ATTTCCGTGC CATCTGGAGG TACATATTCA GGGAGTGGGA AATAAGTTCA
GGGTCCTTTT ACACATCCAA GGGTAAGGTT ACAGTGGATA TGATGCATAT GTACCAGAAT
CTCCGATATA CAGAGGATAA GGATGCTCAG ATTTTAGAGC TACCATACAG AAACTGTAGT
CTATCTATGC TCATTGTGCT ACCAAAGCAT GGGGCTTTAA ATATTAACAT TGATAAGATT
ATAGCTTGGA GGCAGAGCTT GAAATATGTA GATGCAAATC TCTCACTACC TAAATTTGAG
CTTCATGCAA ACTACAAACT TAAGAAACCC CTAGAAAGGA TGGGTCTAAA GAGCGTGTTT
ACCTCTTCTG CAGATTTAAC TGGTATTTTC CCATACAGAG GAATATATGC AGAAGATGTT
TATCACAAGA CCTATATTTC TGTTAATGAG AATGGCACTG AAGCGGCTGC TGCAACTGCA
ATTCCTCAGT CATCAGCGGC TTCGCCTTTT CCTATGAAAA GAGTAGATTT CAATGCCAAT
CACCCATTCT TCTTCACAAT TCAAGATAGA GAAACGGGAG CCATATTCTT TATGGGCTGG
GTAGCAAATC CAATAGTTGA ATAA
 
Protein sequence
MKIGKLSAVL TLIIIAVIIG AFVFQVLIAP KENYISTPNI NLQPQNLNLS WNDRGVNEEN 
LRNVALASGN FGLALFSQIF NVSNNTVISP LSIWLALAML YEGARGNTAE EMRNVMYLPR
NRTILEENIH WFLENFENHT ENYTLSIANA LWAQEGLDIN KDYVQILQDY YNAYFQYLNF
RNAEKARNII NSWVENYTNG KIKNLLPQGS ITPETIAVLT NAIYFRAIWR YIFREWEISS
GSFYTSKGKV TVDMMHMYQN LRYTEDKDAQ ILELPYRNCS LSMLIVLPKH GALNINIDKI
IAWRQSLKYV DANLSLPKFE LHANYKLKKP LERMGLKSVF TSSADLTGIF PYRGIYAEDV
YHKTYISVNE NGTEAAAATA IPQSSAASPF PMKRVDFNAN HPFFFTIQDR ETGAIFFMGW
VANPIVE