| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1251 |
|---|
| Symbol | |
|---|
| ID | 8828213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1199545 |
|---|
| End bp | 1200615 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003483621 |
|---|
| Protein GI | 289596925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG ATACAATTCT TCAAATTTAT GGATTGAAGA AATATTTTCC AGTAAAGGGA
GGTATGTTTG GTAAGATCAT TGCCCATGTT AAAGCTGTAG ATAATGTATC ATTAGAGATA
AAAAAAGGTG AAACCTTAGG TATAGTTGGA GAATCTGGCT GCGGTAAAAC AACATTGGGT
AGGACTATTT TAAGGCTTAT AAAAGCAGAT GATGGCATGA TTTTCTTTGA AACACCCAAA
AATGTGCAGG ATAGAATTAG AGAACTTGTG GGCAAAAAAG ATGAGAAATC TAAAAGAGAA
TTGGAAGAAA TAAGGAAAAA ATATGATTTG AACTTGAAAA AAGATAAGGA AATGATGCCA
TATAGAAGAA AAATGCAAAT AGTGTTTCAA GATCCACAAT CTTCCTTAGA TCCCAGAATG
ACTGTTAAAA AAATACTTGC CGAACCTCTC TTGACGCATA AGGTAGTGCC TCCTCATAAA
GTCGAAGATA GAATAATTGA GCTGCTTGAG CTAGTTGGCT TGAAAAAAGA GCACCTTCAC
AGGTTTCCTC ACGAATTTAG TGGGGGACAA AGACAGAGAA TAGGTATCGC AAGAGCCATA
TCGTTAAATC CTGATTTTAT AGTGCTGGAT GAGCCTACAT CTGCGTTGGA TGTATCTGTG
CAGGCTCAAA TTTTAAATCT TCTAAAGAAG TTACAGAGAG ACCTAAAATT AACATATATT
TTCATCACGC ATGACCTGAG TGTAGCTAGG CACATGGCTC ATAGAATAGG TGTGATGTAT
GTAGGAAAAC TTGTAGAACT AGCACCTGCT GAAGATTTAT TCAATGATCC TCTCCATCCT
TACACTAAAT TGCTCCTTGA ATCCATACCT ATACCAGACC CAACTAAGAG AAAGAAAGAG
AGAAAATTGT TTACAGGCGA GGTACCAAGT GCCGTCAATC CACCCAAAGG ATGCAGGTTT
CATCCAAGAT GCGAATATTT CAAAGCTGGT ATATGTGATA AACTAGAGCC ACCATTAATC
GAAGCAAAGC CAGGGCATTA TGTAGCCTGC CACCTTTACA CAAAGGGATA A
|
|---|
| Protein sequence | MSDDTILQIY GLKKYFPVKG GMFGKIIAHV KAVDNVSLEI KKGETLGIVG ESGCGKTTLG
RTILRLIKAD DGMIFFETPK NVQDRIRELV GKKDEKSKRE LEEIRKKYDL NLKKDKEMMP
YRRKMQIVFQ DPQSSLDPRM TVKKILAEPL LTHKVVPPHK VEDRIIELLE LVGLKKEHLH
RFPHEFSGGQ RQRIGIARAI SLNPDFIVLD EPTSALDVSV QAQILNLLKK LQRDLKLTYI
FITHDLSVAR HMAHRIGVMY VGKLVELAPA EDLFNDPLHP YTKLLLESIP IPDPTKRKKE
RKLFTGEVPS AVNPPKGCRF HPRCEYFKAG ICDKLEPPLI EAKPGHYVAC HLYTKG
|
|---|
| |