Gene Aboo_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1242 
Symbol 
ID8828204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1191800 
End bp1193356 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content36% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003483612 
Protein GI289596916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGT TCAAAAATTT TTCATTTAAA TACGCTTTAT CCAATAAATG GAATTTAGAA 
AAAGTAAATT TGAAAATTGA TAGAGGAGAG TTTGTTTTGG TTGTGGGCCC ATCAGGCTCT
GGCAAGACAA CATTTTTAAG ATCTATAAAT GGACTCATTC CTCATTTTTA TAGCGGTGGA
TATGAGGGAG AAGTGAAAGT AAATGGCAAG GCGATAAAAA ATAACCCTCC AAGAGAAATT
GCAAAGTGCG TGTCCTCAAT CTTTCAAGAC CCTGAAAATC AGATTGTTAT GGAAACTGTT
GAAAGAGAAA TTGCATTTCC CCTGGAGAAT ATGGGACTGC AGAGTTACGA AATATCCAAA
AGGGTAGAAG AAGCTTTAGA TTTAATTAAT ATTGCAAATC TTCGAAATAG AAGAATTGAA
GAGTTATCTG GAGGGGAAAA GCAAAAAGTT GCCATTGCAA CGGCTATTGC CACATATCCT
GATTTTCTGC TCCTTGATGA GCCTACAAGT CAATTATCTC CCAATTCTGC TGAGGATATT
CTAAGCTTGT TAGAAAGACT AAATGATGAT TTTGGGATAG GTATTATCCT AGCAGAGCAT
CGCTTAGAAA GAACTATGTA CAGAGCAGAT AGAATCATTG TGTTCTCAGG AGGGGAAATA
ATTGGTGATG GAGAGCCTAG AATAATAGCA TCTAAAGTTG ATTTTGATGC CTTGGGTATA
GGGTATCCTC AAGTTTCCAG ACTGGCTATT CTATTAAAAA AAGATTATCT GCCTCTCTCC
GTAAAGGAGG GAAGGAGAAT TTTGGCTAAA GATTTAAAAA GATTGAAATA CAAGGGAGAG
AAAAAAGAAT ACGGGAAAAA GATTTTAGAA GCAACAAAAT TAAAATTTTC CTATGATAAA
AATGCAGTTT TAAAAGGATT AAATTTGAGC CTCTATGAGA ACGAAATTTT GGGAATTGTA
GGTAGAAATG GTGCTGGGAA AACTACGCTT GCAAAGATTT TGGTGGGCCT ATTAAAACCG
CATAAGGGAA AAATAGAGAG GAGAGGAAAG ATAAGCATGG TATTTCAAAA TCCAAATTTG
CACCTGTTTG GAGATAGTAT TTATGAAGAT ATTTCTACGG GTGTTAAAAA TGATGAAAAA
GTAGAGCATA TAATGAAAAA GCTAGGTATA TGGAATTTGA GAGATAAGAA CTCAAAGGAT
CTATCTGGTG GAGAGAGAAT GCTAGCTGCC ATTGCCTCTA TTGCAGTTAT AGAACCAAAG
ATACTTATTT TGGATGAGCC TACGAGGGGT TTATCTTACT CACATAAGTT AAAATTATCG
AAATTTCTAA AGGAATATGC AACATCAAGG GGGATAATAC TTATTAGCCA TGATATGGAA
ATGATAGCGA GAACGGTGGA TAGAGTGGCT ATTATGGCAG AGGGAAGAAT CATAGTTGAG
GGAGAGAAAA GAAAGATAAT GCCGAATTCT CTAAACTACA CAACACAACT GAACAAGCTT
TTGTATGGGG TTGGAGATAA AAGGATACTT GTAGAGGAAG ATATTGAGGG ATTATAA
 
Protein sequence
MIEFKNFSFK YALSNKWNLE KVNLKIDRGE FVLVVGPSGS GKTTFLRSIN GLIPHFYSGG 
YEGEVKVNGK AIKNNPPREI AKCVSSIFQD PENQIVMETV EREIAFPLEN MGLQSYEISK
RVEEALDLIN IANLRNRRIE ELSGGEKQKV AIATAIATYP DFLLLDEPTS QLSPNSAEDI
LSLLERLNDD FGIGIILAEH RLERTMYRAD RIIVFSGGEI IGDGEPRIIA SKVDFDALGI
GYPQVSRLAI LLKKDYLPLS VKEGRRILAK DLKRLKYKGE KKEYGKKILE ATKLKFSYDK
NAVLKGLNLS LYENEILGIV GRNGAGKTTL AKILVGLLKP HKGKIERRGK ISMVFQNPNL
HLFGDSIYED ISTGVKNDEK VEHIMKKLGI WNLRDKNSKD LSGGERMLAA IASIAVIEPK
ILILDEPTRG LSYSHKLKLS KFLKEYATSR GIILISHDME MIARTVDRVA IMAEGRIIVE
GEKRKIMPNS LNYTTQLNKL LYGVGDKRIL VEEDIEGL