| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1090 |
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| Symbol | |
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| ID | 8828048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | - |
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| Start bp | 1045102 |
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| End bp | 1047789 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_003483461 |
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| Protein GI | 289596765 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000457669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATC ACATTTTTGG ATTGACAAAG AGAATTAATT CCATAAAATT CGCTTTATTA
TCTCCCGAAG AGATTAGGAG AATGAGTGCA GTAAAGGTAA TAACAGCAGA TACCTATGAT
GATGACGGTT TTCCCATAGA CAAGGGCCTT ATGGACTTGC ACATGGGCGT AATTGAGCCT
GGATTGAGAT GCAAAACATG CGGAGGTAAG GTAGATGAAT GCCCTGGACA CTTTGGGCAT
ATAGAACTCG CTATGCCGGT CATCCATGTG GGTTTCGTAA AAAACATTAA AAATTACCTT
GATGCTACCT GTCGTGAATG TGGCAGGATA AAGCTCAAGG ATGATGAAAT TGAAATTTAC
AAGCAGAAGA TAGAAGAAGC GAAGAAAATG GGAGCCTCGC CATTAGAATT GCTCTTTATA
ACAAAGAAGA TAATAGATGA TGCCTCCTCT CGCCCAATAT GTCCTCATTG TGGTGCAGAA
CAGAAAAAAA TCACACTGGA CAAGCCTACA ACATTTAGAG AAGAGGGCAG AAAATTAACT
CCAAAGGAGA TTCGTGAGAG ATTGGAGCGC ATACCTGACG AGGATCTACC TTTACTTGGA
ATGAATCCCG AAACTGCTAG GCCTGAGTGG ATGGTTCTGA CTGTTCTTCC TGTGCCCCCC
GTCAATGTGA GGCCCACTAT AACCCTCGAA ACGGGAGAGA GAAGCGAAGA TGATTTAACG
CACAAGCTCG TGGATATAAT AAGGATCAAC CAAAGATTGA GAGAAAACAG AGACAGTGGA
GCACCACAAC TCATAATTGA AGATTTATGG GAACTCTTGC AGTACCATGT TACCACCTAC
TTTGATAATC AAACCTCTGG TATACCACCT GCAAGGCATC GCAGTGGCAG ACCTCTCAAA
ACTCTTGTGC AGCGTCTGAA AGGAAAAGAA GGAAGATTCA GATCCAACTT GTCTGGTAAG
AGAGTTAATT TCTCAGCCCG TACAGTCATA TCCCCAGAAC CATTTCTTTC GATAAATGAA
GTTGGCGTGC CTGAGGCGGC TGCTAGAGAG CTTACTGTAC CTATAACAGT TACGGAGTAT
AATATTGAGA AGATGAAAGA AATTGTTAGA AGAGGTTCAA ATCCAAAGGG AGATAAATAC
CTGCCAGGTG CAAATTATGT TATTAGACCT GATGGAAGGA GGATAAAGAT AACAGATAGA
AATGCAGAAG ATGTCTCAAA GAAACTTGAT ATCGGCTGGG TTGTAGAGAG GCATCTCATA
GATGGGGATG TAGTGCTGTT TAATAGGCAG CCATCTCTGC ATAGGATGAG CATGATGGGT
CATCTCGTAA AAGTCATGCC AAATCGCACA TTCCGCTTCA ACCTTGCAGT TTGCCCACCT
TATAATGCTG ATTTCGATGG AGATGAGATG AATCTTCATG TGCTCCAGAG CGAGGAGGCA
AGGGCTGAAG CGAAGATTTT AATGCTTGTG CAAGAGCATA TTTTATCTCC GAGATTTGGT
GGTCCGATTA TAGGCGGCAT ACACGACCAC ATAACTGCAA TGTTCTTGCT TACTCATAAA
AATCCAAAAT TCACAAAGGA GCAAGCAATC CATATGCTAT CTTACTTGGA TTATGACGAG
CTTCCAGAGC CGCATAAGGA CGAGAATGGA AACGAATTTT ACTACGGCAA AGAGCTATTC
TCCTTAATTC TTCCAAAGGA TTTAAATATG GAATTCAAGA GCAAGATTTG TGACCCATCT
GTGTGCAACA ACAAATGTGT GCATGAAGCT TGCCCGATAG ATGCTTATGT GGTAATTCGC
AATGGAAAAC TTGTGGCAGG TACAATAGAT GAAAATGCGA TTGGTTCAAT GAAGGGTAAA
TTGCTTGATA GAATAGCAAA AAGAGGTAGC AAAGAAGCGC GTGAGTTCAT AGACAATATG
ACAAGATTGG CAGTGGGAGT AATATCCTAT CGCGGTTTCA CTTCAGGAAT AGATGATGAA
GATATACCTG AAGAGGCTAT TATCCAGATT CATGAAATAA TAAAAGAATC AATAAAGAAA
ACGGACGAAT TGATTGAATT ATATAAGCAA GGCCTATTGC AACCAGCTCC TGGAAGAAGT
GTAGAAGAAA CTTTAGAAAT GGAGATAATG CGCGTGCTAG CACATGCAAG AGATGAAGCG
GGTAAGATAG CTAGCAAGCA TTTAGGTTTA GAGAATTCAT CGGTTATTAT GGCAAGAAGC
GGAGCTAGAG CATCCATGCT CAACCTATCC CAGATGGCTG GAAGCATTGG ACAGCAGTCT
GTGAGAGGTC AAAGATTACA TCGCGGTTAT CAAGATCGCA CGCTACCACA TTTTAAACGT
GGAGATTTAG GTGCCCTAGC AAGGGGATTT GTAGAATCCT CTTACAAGAA GGGCTTGAGT
CCAACAGAGT ATTTCTTCCA CTCAATGGGT GGACGAGAGG GCTTAGTGGA TACTGCAGTT
CGTACATCCC GCAGTGGTTA TATGCAGAGA AGATTAATCA ATGCCCTTGA GGATTTGAAA
GTTATAGAGG ATGGAAAAGT TGTGGATACT GCGGGCAATG TTGTGCAGTT CATTTACGGA
GAGGATGGTG TTGACCCCAC TCGCAGTTCA GGTGGAGAAA ATGTAAATAT GGATGAGATT
CTAACGGATG TTCTTGGAGA CAAGTATCTT TTAAGGAGGA GGAAGTAA
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| Protein sequence | MSHHIFGLTK RINSIKFALL SPEEIRRMSA VKVITADTYD DDGFPIDKGL MDLHMGVIEP
GLRCKTCGGK VDECPGHFGH IELAMPVIHV GFVKNIKNYL DATCRECGRI KLKDDEIEIY
KQKIEEAKKM GASPLELLFI TKKIIDDASS RPICPHCGAE QKKITLDKPT TFREEGRKLT
PKEIRERLER IPDEDLPLLG MNPETARPEW MVLTVLPVPP VNVRPTITLE TGERSEDDLT
HKLVDIIRIN QRLRENRDSG APQLIIEDLW ELLQYHVTTY FDNQTSGIPP ARHRSGRPLK
TLVQRLKGKE GRFRSNLSGK RVNFSARTVI SPEPFLSINE VGVPEAAARE LTVPITVTEY
NIEKMKEIVR RGSNPKGDKY LPGANYVIRP DGRRIKITDR NAEDVSKKLD IGWVVERHLI
DGDVVLFNRQ PSLHRMSMMG HLVKVMPNRT FRFNLAVCPP YNADFDGDEM NLHVLQSEEA
RAEAKILMLV QEHILSPRFG GPIIGGIHDH ITAMFLLTHK NPKFTKEQAI HMLSYLDYDE
LPEPHKDENG NEFYYGKELF SLILPKDLNM EFKSKICDPS VCNNKCVHEA CPIDAYVVIR
NGKLVAGTID ENAIGSMKGK LLDRIAKRGS KEAREFIDNM TRLAVGVISY RGFTSGIDDE
DIPEEAIIQI HEIIKESIKK TDELIELYKQ GLLQPAPGRS VEETLEMEIM RVLAHARDEA
GKIASKHLGL ENSSVIMARS GARASMLNLS QMAGSIGQQS VRGQRLHRGY QDRTLPHFKR
GDLGALARGF VESSYKKGLS PTEYFFHSMG GREGLVDTAV RTSRSGYMQR RLINALEDLK
VIEDGKVVDT AGNVVQFIYG EDGVDPTRSS GGENVNMDEI LTDVLGDKYL LRRRK
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