| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1062 |
|---|
| Symbol | |
|---|
| ID | 8828019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1021005 |
|---|
| End bp | 1022033 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003483433 |
|---|
| Protein GI | 289596737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000287567 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTG GAAAAGGAAA ATCTAGAAAG GCACTATCTT TCGTGGTACT AATCTTGACA
TCCATACTCT TATCCTCTGG AAAAGTGAGT GCAGAGACCA TAAAAACGGA GCAATTAGTT
CAAGATAATA CCTTCACATC TTCGAACAAT AGCGCTTATT GGACTTATAC ACATGCGGGA
GATTCGCGCA TAGATTGGCT TTTATACCAT TACTCCAACA AAGGACGATG GTATGATGTG
GTTCAAGCGA GAAGTGATGA TGAGACAACT TTAGGTGAAG GGTATGGCTA TATTTGGCAA
AAGATTAACA TCCCGAATGG AGATATAATA AACGCAACTT TTTCGTTAGA TTATGAAGCC
GATGAAGATT CTAGTACAAA GGAATATGTT TGGGTGGCTG TAAAGGATGG ATACAATGTT
TCAAATGAGG GATGGGAAAG CCAACTTGGT ATGGCTTATG AGAAGATATA CACAGCAAAT
TTAACGGATA TTGTAAAGCA ATATGCTGGA AAATCCTTGT ATGTTTTAGC AGGTTTGCAC
ATAGTAAGTG GTTCTAAGCT TAAGTATGTG GAAACAACCC TTTACAATGT TTCTCTCACG
ATAACTTATA AGGTATCATC AAGCGGTAGC GGAGGTTGGT GGGGCAATGG TGGCTCTTGG
AGTGGAGGTG GCTCTGGTGG CTGGTGGGGA AGCGGTAGCG GTTGGAGTGG AGGAGGAGGA
TTTTGGCATG GAAGTGGAGG AGTTTGGTTT GCAGGTAATA CCTCTGGGAA CGCAACCTAT
GTGGAGTATG TGGTGGGGAA CATCCAGAGG GCATTAGCCA TAGTTGGCGG TGCTGTGATA
AGTGTTCTCT GGGTGAAAGA GGCGCTGGAT TTCTTCTCCG ATGACCCCGA TAGGAAATCA
CGGGCAAAAG AGAACGCTCT AAAAGCTCTC CTCGCAACGC TCATAATCGC CATGGCGGTG
CTGGGAACTA TATGGCTCCT TGCGGGATGG GCAGTAGGAG CGTTTGACAT AGTGGGGGTG
ATATTGTGA
|
|---|
| Protein sequence | MKSGKGKSRK ALSFVVLILT SILLSSGKVS AETIKTEQLV QDNTFTSSNN SAYWTYTHAG
DSRIDWLLYH YSNKGRWYDV VQARSDDETT LGEGYGYIWQ KINIPNGDII NATFSLDYEA
DEDSSTKEYV WVAVKDGYNV SNEGWESQLG MAYEKIYTAN LTDIVKQYAG KSLYVLAGLH
IVSGSKLKYV ETTLYNVSLT ITYKVSSSGS GGWWGNGGSW SGGGSGGWWG SGSGWSGGGG
FWHGSGGVWF AGNTSGNATY VEYVVGNIQR ALAIVGGAVI SVLWVKEALD FFSDDPDRKS
RAKENALKAL LATLIIAMAV LGTIWLLAGW AVGAFDIVGV IL
|
|---|
| |