Gene Aboo_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1050 
Symbol 
ID8828007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand+ 
Start bp1008930 
End bp1009484 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003483421 
Protein GI289596725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000995235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCAT CTTTGAGTAG CATAAAGGAG CGAAGAAGAA GGCTGGGGTG GAGTCAAAAA 
GAGCTGGCAA AAAGGAGTGG AGTGTCACAA TCAGCAATAA CGAAGATAGA GAAGGGTGAC 
ATGAACCCAT CTTACACGCT AGCGGTGAAG ATTTTCAATG CCCTGGATGA AGGAGAGCGA 
GAGAAGTACA AGGGAAAGAA AGCAAAGGAT TTGATGAACA CTACTGTGAT ATCTTTATCT 
CCCAAGGATA GAGTGAAAAA AGCAAGAGAG TTGATGAAAG AGCACGGGAT AAGTCAGATA 
CCGGTGGTGG AGAGAGATAA GGTTGTGGGG ATGATCACGG AGAATGATAT TCTGGAGGGA 
TACGAAAAGC ACGGAGCTGG GATAGTTGAT CTCTTGGTTG AGGATGTTAT GGGTCCTCCG 
CCAATTGCAG TGAGAAAAGA TACGAGCATG GATGCCATTG TTGAGCTTTT GAAGCAGGAG 
CAGGCGTTGC TCGTCGTGGA GAATGATGAG CTCTTGGGAA TAATCACCAA AGCAGACATA 
GTTTACAAGG GATGA
 
Protein sequence
MIPSLSSIKE RRRRLGWSQK ELAKRSGVSQ SAITKIEKGD MNPSYTLAVK IFNALDEGER 
EKYKGKKAKD LMNTTVISLS PKDRVKKARE LMKEHGISQI PVVERDKVVG MITENDILEG 
YEKHGAGIVD LLVEDVMGPP PIAVRKDTSM DAIVELLKQE QALLVVENDE LLGIITKADI 
VYKG