| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0844 |
|---|
| Symbol | |
|---|
| ID | 8827794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 805905 |
|---|
| End bp | 806957 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003483215 |
|---|
| Protein GI | 289596519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.024977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA CATTATTGGA TGTTAGAAAC CTTTCGGTGC ATTACAAGAT TCAAGGTGGC
TGGGTGTATG CGGTAGATGA TGTTAGTTTC AAGTTAGAAA AAGGAGAAAC GATGGGTTTA
GTGGGTGAAT CAGGCTGCGG TAAAACAACC ACTGGATATG GCATAACCCA GTTGCTTGCA
AGCAATGCAT ATTACAAGGA AGGAAGCAAA GTGATATTCG ATGGTAAGGA TTTTGTTCAA
ATGAGCACTG TGCCAAGCAA GGAGTATAAG GAGTATAGGA AAATAGTTGA ATACCATCCA
GAGATGCGCA AGTATAGGTG GAAGAGGATA TCTATGATAT TCCAAGGTGC AATGAATGCG
TTTAATCCTG TGTTCAAGGT TGGAGATCAA ATAATTGAAG CCATAAAGGC TCATGAAGAT
GTTACTGACG AGGAAGCTAG GAAAAGAGTT GAAAGGTTAT ACAAACTGGT TGGTATACCG
GTGGACAGAA TAGATAACTA TCCGCATGAG TACAGTGGTG GTATGAAGCA GAGAGCTATG
ATTGCAATGG CTCTAGCACT AAATCCAGAT TTAATTATAG CAGATGAGCC CACTACGGCC
CTGGATGTGG TTACTCAGGA TAGAATTCTA GGTGAGATGG CAAGATTGCA GAAGAGGGAG
AAAGTGGCAA TGATTCTTAT TACCCACGAT GTCAGCGTTG TGGCTGAAAT GGCACACAAG
ATGGCTGTGA TGTATGCGGG ACATCTTGTA GAGACAGGTA CAACTAGACA GGTATTCAAA
GAGACAGCTC ATCCTTATAT GGAGGCTCTC TTAGCAGCTT TCCCAAATAT AAAGAAAGAG
AAAAAAGAAA GGCTTAAAGC TATACCTGGC TCTCCACCGG ATTTGTCTAA TCCTCCTAAG
GGTTGTAGAT TCGCACCTCG CTGTCCTTAC GCTAAGGATA TATGCTTAGA AGAAGAGCCA
CCTGTAATTG AAGTTGCTCC TGGACATTAT TCAAAATGTC ATTTTGCAGA GGAGTTGTAT
GGTGAACTAG GCGGTGGTGA GAGCAATGAG TGA
|
|---|
| Protein sequence | MAKTLLDVRN LSVHYKIQGG WVYAVDDVSF KLEKGETMGL VGESGCGKTT TGYGITQLLA
SNAYYKEGSK VIFDGKDFVQ MSTVPSKEYK EYRKIVEYHP EMRKYRWKRI SMIFQGAMNA
FNPVFKVGDQ IIEAIKAHED VTDEEARKRV ERLYKLVGIP VDRIDNYPHE YSGGMKQRAM
IAMALALNPD LIIADEPTTA LDVVTQDRIL GEMARLQKRE KVAMILITHD VSVVAEMAHK
MAVMYAGHLV ETGTTRQVFK ETAHPYMEAL LAAFPNIKKE KKERLKAIPG SPPDLSNPPK
GCRFAPRCPY AKDICLEEEP PVIEVAPGHY SKCHFAEELY GELGGGESNE
|
|---|
| |