| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0814 |
|---|
| Symbol | |
|---|
| ID | 8827764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 778153 |
|---|
| End bp | 779925 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | DNA ligase I, ATP-dependent Dnl1 |
|---|
| Protein accession | YP_003483185 |
|---|
| Protein GI | 289596489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.389607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTACA AGATTATTGC TGAAACTTAC AGCAAGATAG AATCCACCAC AAAGAGGTTG
GAGATGACGG ATTATCTTGT TGAACTTTTC CATAATACTC CGGAGGATGT TATTGATAAG
GTTATTTATC TCACACAGGG TAAGCTTTAT CCTGATTATA TGGGTATTGA ACTCGGCTTA
GCGGAGAAAT TGGCGATGAG GGGAATTACG AAGGCAACAG GAATAAAGGA GAAAACCCTT
GGCGAGATGC TAAAGAAATA TGGTGATCTA GGAAGTGTAG CTGAGGAAGC TATAAAGAAG
AAGAGACAGA CAACCTTATT TTCATTTGAA GAAGAGAAAA ATCTTACTGT GGAGAAAGTT
TATGAGAACT TTGAAAAAAT TGCCAAAGCG GAGGGGCCGG GCTCACAGGA CAGGAAAATA
CAACTTCTTG CTGAATTGTT GAATTTAGCA AAGCCAATAG AGGCTAAGTA CATAGTGCGC
ACGGTTGAAG GTAAATTGAG ATTGGGTATA GCGGATATGA CTATTCTTGA TGCCCTTTCA
ATAGCGTATG GGAGAACGAA GGAGTTGAGA AGTCTCGTAG AAAGGACTTA CAACATTCAT
CCTGACCTTG GCTATATTGC AAAAAAATTA GCCAAGGAGG GGATTGATGG AGTTAAAGAT
ATAAAGATTG AACTGGGTAT ACCCATAAGA GCTATGCTTG CCGAGAGATT ACCATCCTTG
GAAGAAATCC TTGCGAAGAT GGGAGGCAAA GCCGCTTTTG AATACAAGTA TGATGGCATG
CGTATACAGG GTCATGTAGG AAAGGATAAA GTATGGCTTT ATTCCCGAAG ATTGGAGAAT
TTAACATCTC AATTTCCGGA TGTTGTAGAG GCCTTGAAAG AAGCATTTCA AGGGAAGGAA
GGTATATTTG ATGGTGAAGC AGTGCCGGTG GATATACATA CGGGAGAATT GCTGCCTTTT
CAAGTTGTAT CGCATAGAAG GGGAAGAAAA TACGAAATAG AGAAGGCTAT TGAGGATTAT
CCAGTCGTGC TTTTCCTCTT TGATATAATT TATCTCGATG GAGAGGACCT GACATCAAAA
CCTTATCCTG AGAGAAGGAA AATTTTAGAG AGGGTTATAA ATCCCACGGA AAGAGTTAAG
TTCGCCCACA GAATAGTTTC CTCCGATATT GGTGAGATTA GAGAATTCTT CAACAAAGCC
ATAGAGGATG GATGTGAGGG GCTGGTAGCA AAGAGCATCG GCAAGGAAAG TATTTATCGT
GCTGGAGCTA GAGAATTTCT ATGGATTAAA TATAAGAGAG ATTACAAGGT TGAAATGGGG
GACACGGTAG ATTTGGTGGT TGTGGGTGCC TTTGCTGGAA AAGGAAAGAG AAAGGGGACA
TATGGGGCTT TGCTTATGGC AGCTTATAAT CCTGAGAAGG ATAGGTTTGA AACTGTGTGC
AAGCTTGGCT CAGGATTTAC GGATGAGCAA CTTGCTTACC TACCTCGCAA GTTTGAAGAC
TTAAAAATTG AAAATAAACA TCCTAGAGTG TGGAGCGAAA TGGAAGCTGA CTACTGGTTC
GTTCCCAAAG TTGTGCTTGA AGTTATAGGT GCTGAAATTA CCCTGAGCCC TACACATACA
TGCGCTCGCG ATGTTATTGA AAAAGGCACC GGGTTGGCAA TAAGATTTCC TAGGTTTACG
GGTAGGTGGA GAGATGACAA GAGTCCGGAG GAGGCCACGA CAACAAAAGA GCTAATAGAA
ATGTATAAAA ATCAAATAAA GAAAATAAGG TAG
|
|---|
| Protein sequence | MEYKIIAETY SKIESTTKRL EMTDYLVELF HNTPEDVIDK VIYLTQGKLY PDYMGIELGL
AEKLAMRGIT KATGIKEKTL GEMLKKYGDL GSVAEEAIKK KRQTTLFSFE EEKNLTVEKV
YENFEKIAKA EGPGSQDRKI QLLAELLNLA KPIEAKYIVR TVEGKLRLGI ADMTILDALS
IAYGRTKELR SLVERTYNIH PDLGYIAKKL AKEGIDGVKD IKIELGIPIR AMLAERLPSL
EEILAKMGGK AAFEYKYDGM RIQGHVGKDK VWLYSRRLEN LTSQFPDVVE ALKEAFQGKE
GIFDGEAVPV DIHTGELLPF QVVSHRRGRK YEIEKAIEDY PVVLFLFDII YLDGEDLTSK
PYPERRKILE RVINPTERVK FAHRIVSSDI GEIREFFNKA IEDGCEGLVA KSIGKESIYR
AGAREFLWIK YKRDYKVEMG DTVDLVVVGA FAGKGKRKGT YGALLMAAYN PEKDRFETVC
KLGSGFTDEQ LAYLPRKFED LKIENKHPRV WSEMEADYWF VPKVVLEVIG AEITLSPTHT
CARDVIEKGT GLAIRFPRFT GRWRDDKSPE EATTTKELIE MYKNQIKKIR
|
|---|
| |