Gene Aboo_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0736 
Symbol 
ID8827682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand- 
Start bp699123 
End bp699794 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content37% 
IMG OID 
Producthaloacid dehalogenase, type II 
Protein accessionYP_003483109 
Protein GI289596413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.439384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG TTATGTCCTT TGACTGCTAT GGAACTCTGA TTGACTGGGA GGAAGGTATA 
TGGAATACCA TTAACAAGAT TCTTGCAAGA AGAGGGATAA ACAAGAGAAG AGAGAGCATT 
CTTTCTCTGT ATGCCCAGAT AGAATCAAGA GCAGAAAAGG AGTACAAGCC ATACAAAGAG 
ATTTTAAAAG AAGTAATGGG TGAAATTGGG AGAGTTCTGG GTATTAAGCT TGAAGAGGAG 
GAGAAATATG CCTTGGTAAA GAGCATACCC AATTGGCCAG CATTTTCAGA TTCAAAGAAT 
GCATTGATGA GAATAAAGGA AGATTTTAGA ATTGCAATAA TCTCAAATGT GGATAACGAT 
ATTATTGAAG AGACCATTAA AAATTTAGGT GTGGATTTTG ATTTTATCAT CACCGCAGAA 
ATGGTTAGAG CTTATAAACC AGATTTGAGG GTATTCAAAT ATGCCAAGGA TATTATGCAG 
GTAGATAAAT CCAATTGGTT TCACACTGCT CAGAGTATCT ACCATGACAT AATTCCCGCA 
AAAAAATTAG GAGTGAAAAC TGTGTGGATA AAAAGAAGAG GATTCGGCGC CACTCCCCCG 
GCAAATACTA AAGCTGATTT CAATTTTCTA TCCTTAGAAG ATCTAGCAAA TAACATTGGT 
TCTCTCAAAT AA
 
Protein sequence
MKPVMSFDCY GTLIDWEEGI WNTINKILAR RGINKRRESI LSLYAQIESR AEKEYKPYKE 
ILKEVMGEIG RVLGIKLEEE EKYALVKSIP NWPAFSDSKN ALMRIKEDFR IAIISNVDND 
IIEETIKNLG VDFDFIITAE MVRAYKPDLR VFKYAKDIMQ VDKSNWFHTA QSIYHDIIPA 
KKLGVKTVWI KRRGFGATPP ANTKADFNFL SLEDLANNIG SLK