Gene Aboo_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0516 
Symbol 
ID8827461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp500248 
End bp501786 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content40% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003482889 
Protein GI289596193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TGACCGAGAA AGAGAGGGGG AAGTGGGGAG TTCTCTATAT GATGAGCTTT 
GCCATGTTCA TTATGACCAT AGATATGACT ATGATGAATG TTTCAATTTC CGCCCTTGTT
AGAGATTTGA ATACCACGGT GAGTGGTATA CAGTTAGCCA TAGCACTTTA TACATTAGTT
ATGGCAGCGT TTATGATCGT AGGTGCTAAG ATGGCGGATA TCTGGGGTAC GAAGAAGGTT
TTTGTGGTTG GGTTGGCCAT TTACACTATA GGTACTACTA TGGCCACATT TGCTCCAAAT
TTGCTTATTC TTCTCATGGG GTGGTCAATC TTTGAAGGGA TTGGTGGGGC AATGATGATG
CCAGTTACGG TTACTTATAT AACGAAGGAT TATACCGGGA AAGATAGGAT ATTTGCATTT
GGCGTATGGG GTGCTATTGC GGGAGCAGCA GCCGCCTTTG GTCCTATTAT TGGGGGTGTT
TTTACCACCT ATTTAACTTG GCGTCTTGGA TTTGGAATGG AGGCGATTAT TGCCATTGGA
ATGTTTGCAA AAATGGGAAT ATTGAAAGAT TATCAGCCTA CTCATAAAAT AAAGTTGGAT
ATTCTTGGAG CGCTGCTCGT GGGGGTGGGC CTATTTTTGA TCACTTTATC TGTGCTCTTA
ATAGACCCGT TTGGAGATGC TCCAGTTATA GGCGTACTGT CTCTAGGGAT TCTAGTAATA
GCAGGATTTG TGTACCATGA GAAAAATGTA GTGCGTAAAG GATTAGATCC CCTTGTAAAT
TTAAAACTCT TCAAATCTAA AACTTTTGTT GTAGGAAATT TAGTGAGTAT ATTCTTTCAG
ATAACCCTTG CAGGCCTGAT GTTCACATTG CCTGTATTCC TTCAAAATGT TGCCAATTAC
AATGCTATGA GCACTGGATT ATCTCTTGTT CCCCTATCCA TAATGATGTT TATATTTTCC
ATATATGGTC AAAAACTGCT AAAGTATATG ACAGCCAAGA GGGTAATACA GCTTGGAATC
GTCTTTGCCT TTGTAGGCTT GTTTCTTCTT TTCATTGTTT TCTCTCCAAC TACAACTGGC
TGGGATTTAA TATGGGGTCT AGCATTCTAT GGAACTGGCT TGGGATTGAT ATTCTCGCAG
ATAACTAACC TAGCCATGGC TGGGGCTAGT CCAGAGGAGG AAGCTGAAGC TTCGGGAGTG
TTTAATTCAC AGAAACAACT TGGAATGAGC CTAGGTACTG CCTTTATAGG TGCAGTTCTT
GTGCTTGGCA TGATCAACAA TATTGCGAGA GGTATATACG AGTCCAATTA TTTTCCCGGA
TACAGCAAGG AAGAAATAAA GCAGAAGGTT ATTGATTGGA TAGTGCATAT GAAACAGGGT
CAAATAGTTA TTCCACCTGA TTATATGCAG CATGTAAATC AAATTGTTCA ATGGGCACTT
GGTAATGCAA TGCGCTCTGC AATGATATTT CTTATGATTT CACTGGCTAT TGGTGCAATA
TTCTCAATAT GGCTTCCTAA TAACCCTGAG AAATCTTAG
 
Protein sequence
MKSMTEKERG KWGVLYMMSF AMFIMTIDMT MMNVSISALV RDLNTTVSGI QLAIALYTLV 
MAAFMIVGAK MADIWGTKKV FVVGLAIYTI GTTMATFAPN LLILLMGWSI FEGIGGAMMM
PVTVTYITKD YTGKDRIFAF GVWGAIAGAA AAFGPIIGGV FTTYLTWRLG FGMEAIIAIG
MFAKMGILKD YQPTHKIKLD ILGALLVGVG LFLITLSVLL IDPFGDAPVI GVLSLGILVI
AGFVYHEKNV VRKGLDPLVN LKLFKSKTFV VGNLVSIFFQ ITLAGLMFTL PVFLQNVANY
NAMSTGLSLV PLSIMMFIFS IYGQKLLKYM TAKRVIQLGI VFAFVGLFLL FIVFSPTTTG
WDLIWGLAFY GTGLGLIFSQ ITNLAMAGAS PEEEAEASGV FNSQKQLGMS LGTAFIGAVL
VLGMINNIAR GIYESNYFPG YSKEEIKQKV IDWIVHMKQG QIVIPPDYMQ HVNQIVQWAL
GNAMRSAMIF LMISLAIGAI FSIWLPNNPE KS