Gene Aboo_0461 details

Gene Information

• Locus tag: Aboo_0461
• ID: 8827404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 449533
• End bp: 450255
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 35%
• Product: PHP domain protein
• Protein accession: YP_003482834
• Protein GI: 289596138

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCCCT ATATCTCCTC AATGATTAAT TTCCATATCC ATAGCACCTG GAGCGATGGC 
TTATACACCC CTGAAATAAT AGTTAGAGAG GCAATAAAGA AAAAAATGGA AAAAATAGCA 
ATTACAGACC ACTATGAGAC AAAGAAAGTC AACTCTGTAC CAAAGAAATA TCTAAAAATG 
TATGTGGAAG ATTTGAAAGC TCTTAGAAGG AAGTATGGAG ATAAAATAGA TATTTACATA 
GGGATTGAAG TTGATTTTTC ACCTCGCACA AATATTGATA ATTTACCAAA TTTTGAGGAG 
TTCGATCTTG TTCTATTTGA ATATGTTCAA GATTCTCTCT GGGACGGGTA CCCGCTCTGG 
ATGCTCCTTG ACAAAAGAAA GGAAATTGAC GCCTTCGTAA TCTTAGCTCA CAATGACCTA 
AATAAAAACT TTGGAGATGC CAATATAGAT GCTTTTTTGC GAGTTTTAGA ATCTGATAGA 
ATAGGTGTGG AATTGAATAC GAGTATGAAT TACACAAAAC TTGGCACTTA CTACTATCGC 
CTTGCAGAAG ATATATTCAA AGAGATGAAA AATTACAAAA TCCCGATATC TGTGGGAAGC 
GATATGCATG AGGATATTGA GAGAGTTGAT GATGTTAAAG ATGCACTTTC ATTCATCCAA 
GAATTACATC TTGAAGATAA CCTAAAATTG TTCTTGAAGG AGGTGAGTGA GAATGAAGGA 
TAG 

 

Protein sequence

MRPYISSMIN FHIHSTWSDG LYTPEIIVRE AIKKKMEKIA ITDHYETKKV NSVPKKYLKM 
YVEDLKALRR KYGDKIDIYI GIEVDFSPRT NIDNLPNFEE FDLVLFEYVQ DSLWDGYPLW 
MLLDKRKEID AFVILAHNDL NKNFGDANID AFLRVLESDR IGVELNTSMN YTKLGTYYYR 
LAEDIFKEMK NYKIPISVGS DMHEDIERVD DVKDALSFIQ ELHLEDNLKL FLKEVSENEG