Gene Aboo_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0405 
Symbol 
ID8827348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp403322 
End bp405505 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content45% 
IMG OID 
ProductAAA family ATPase, CDC48 subfamily 
Protein accessionYP_003482778 
Protein GI289596082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0846413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATAAAAATGA AGGAATAGTG GTGAAAGTAG CGGAAGCACG CTCAAGAGAT 
GTGGGGCGTG GAATTGCAAG GATAGACCCT GTTATATTTG AAAAGATGGG CTTGATGCCC
GGAGATACAA TATTAATTGA GGGTAAGAAG AAAACAGCTG CAATGGTTAT GCGAGGATAT
CCTGAGGATG AGGGAAGTGG GCTTATAAGA ATTGATGGAT ACACCCGCAG AAATGCTGGT
GTTGGAATAG ATGATAAAGT CACGATAAAG AAAGTATCTG CTACACCCGC AACTCAAGTT
ACATTCGCTC CAACTCAGCC TCTTCGCCTT ATGGGTGGAG AGGAATACCT CAAGAATCTG
CTTGAGGGGA GGGTGATTAC CAGGGGTGAT GTCATCACGC TCAATGTTAT GGGTAATACG
ATTGATCTCA TAGCAACAGT TGTTAAGCCC GTTAAAGATG TGGTATTGAT AACCTCCTCC
ACCGAGATAA AAATAAGTGA GAAGCCTGCA AAGGAATCTC AAGGTATTTC GATGGTTACC
TACGAGGATA TTGGTGGTCT CAAGGAGGAA ATAAAGAAGA TTCGCGAGAT GGTAGAGTTA
CCGTTAAGGC ATCCAGAGCT ATTTGAGAGA TTAGGCATTG AACCACCAAA GGGCGTGTTG
CTTTATGGAC CTCCAGGGAC AGGTAAGACC CTGCTTGCTA AGGCTGTTGC AAATGAAGCA
AACGCCCATT TCATATACCT CAGTGGACCA GAGATAATGA GTAAATTCTA TGGCCAGAGC
GAGGAGAATT TAAGGGAGAT ATTCAAAGAG GCACAGGATA ATGCTCCTAG CATAATATTC
ATAGACGAAA TTGATTCCAT AGCTCCGAAG AGAGACGAGG TTAGCGGTGA GGTAGAGCGT
AGAGTTGTGG CACAATTATT GGCTTTAATG GATGGCTTAG AATCCCGCGG TAAGGTTGTC
GTTATAGGTG CAACCAACAG GCCAAATGCA TTGGACCCTG CGTTGCGCAG ACCTGGAAGA
TTTGATAGGG AAATTGAAAT AGGCATACCT GGAAAGAATG CGAGGAAGGA GATACTTGAG
ATACATACTC GCGGAGTTCC TCTTGCTGAG AATGTTGATT TGGAAAAACT TGCGGATATG
ACCCATGGCT ATGTGGGGGC AGATTTGGCT GCACTGGTTA AAGAGGCTGC AATGCGCGCA
TTGAGAAGGG TCATACCTGA AATTGACCTT GAAATGGAGA AAATACCGGT GGAAATACTG
GAGAAATTGC AGGTAACTTG GGAGGACTTT ATGGACGCAT ATAGGGAAAT GCAGCCCAGC
ACGATGAGGG AGGTGCTTAT AGAAAAGCCG AATATCCATT GGGACGATAT AGGAGGTTTG
GAGCAGGTAA AGCAAGAGTT GCGCGAGGTT GTAGAATGGC CCATGAAGTA TCGTAAGTTA
TTTGCTCATA TGAAGGTCAA GATTCCTAAG GGCATACTAC TTTATGGACC TCCAGGCACA
GGTAAGACCC TGCTTGCCAA GGCAGTGGCT ACTGAGAGTG AGGCGAACTT CATAAGTGTT
AAAGGTCCAG AGTTCCTGAG CAAGTGGGTT GGGGAGAGTG AGAAGGCCGT GCGCGAGGTA
TTCCGTAAGG CAAGACAGGC AGCACCGGCG GTTATATTCA TAGATGAGAT AGATGCCATT
GCACCAATGC GAGGAAGAGA TATAGGCTCC CATGTCACAG AGCGTGTGGT ATCTCAAATA
TTGACCGAGA TGGATGGTCT GGAAGAATTG CACAATGTTA CGGTTATAGC AGCCACAAAT
CGTCCGGATA TACTTGATCC AGCTTTACTT AGGCCCGGGA GGTTCGATCG CATAGTGTAT
GTACCTATTC CAGATAAGGA TGCGAGAAAG GAAATCTTCA AGATACATCT CCGTGGCAGG
CCATTGGCAG AGGATGTGGA CATAGATAAG CTTGCTGAGA AAACAGAAGG ATATACGGGC
GCAGATATAG AGGCTGTATG CAATGAAGCA ACGATACTTG CACTGAGAGA GTTCATACAG
AGCGGTAAGA ATCCCGATGA ACCAAAGGAT GCAAAGATTG AAATGAAGCA CTTTGAGGAA
GCCCTGAAGA AAGTAAAACC ACTTTCAAAA GAAGAAAGAG AAATGTACGA GAGAATGGTG
GATCGCTTTA GAAAGAGGGA ATGA
 
Protein sequence
MKKNKNEGIV VKVAEARSRD VGRGIARIDP VIFEKMGLMP GDTILIEGKK KTAAMVMRGY 
PEDEGSGLIR IDGYTRRNAG VGIDDKVTIK KVSATPATQV TFAPTQPLRL MGGEEYLKNL
LEGRVITRGD VITLNVMGNT IDLIATVVKP VKDVVLITSS TEIKISEKPA KESQGISMVT
YEDIGGLKEE IKKIREMVEL PLRHPELFER LGIEPPKGVL LYGPPGTGKT LLAKAVANEA
NAHFIYLSGP EIMSKFYGQS EENLREIFKE AQDNAPSIIF IDEIDSIAPK RDEVSGEVER
RVVAQLLALM DGLESRGKVV VIGATNRPNA LDPALRRPGR FDREIEIGIP GKNARKEILE
IHTRGVPLAE NVDLEKLADM THGYVGADLA ALVKEAAMRA LRRVIPEIDL EMEKIPVEIL
EKLQVTWEDF MDAYREMQPS TMREVLIEKP NIHWDDIGGL EQVKQELREV VEWPMKYRKL
FAHMKVKIPK GILLYGPPGT GKTLLAKAVA TESEANFISV KGPEFLSKWV GESEKAVREV
FRKARQAAPA VIFIDEIDAI APMRGRDIGS HVTERVVSQI LTEMDGLEEL HNVTVIAATN
RPDILDPALL RPGRFDRIVY VPIPDKDARK EIFKIHLRGR PLAEDVDIDK LAEKTEGYTG
ADIEAVCNEA TILALREFIQ SGKNPDEPKD AKIEMKHFEE ALKKVKPLSK EEREMYERMV
DRFRKRE