Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0309 |
Symbol | |
ID | 8827251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 306685 |
End bp | 307500 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | spermidine synthase |
Protein accession | YP_003482682 |
Protein GI | 289595986 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCTCT GGTACTCGGA GATGCATACT AAAAATATAA AGATTGGATT CAGAATAAAA GAGGAAATTG GGCATGTTCA TTCTGATTAT CAGGATATTC ATCTCTTCGA TACCTATGAT TATGGAAAAT TGCTTGTTAT TGATGGAACT GTTCAGATGA CTGAGAGGGA TGAGTTCATA TATCATGAAA TGATAGTTCA TCCTCCTTTG CTCACGCATA GAAATCCAAG AAAAATTTTG ATTATTGGGG GAGGTGATGG GGGCGCTGCA AGGGAAGTTT TAAAGCATGA TGTGGATGAA GTGCATTTAG TAGAAATTGA TGAAGAGGTT GTTAAAATTG CCAGAAAACA TTTGCCAAGC GTAGCCTCAA GTTATGAAAA CCCCAAATTG CATTTGCACA TAGAAAATGG AATAGAATTT GTAAAGAAAA ACAAAAATTT TGATGTAATA ATAATTGATT CCACCGATCC CGTTGGTCCA GCTGAAGGGT TGTTTACAGA GGAGTTTTAT ATGAATGTTA AAAAATCCTT GGCAGATGGG GGGATAATAT CACAGCAATG CGGCACTCCA TTTTATCACC CAGAAGAAGT GTGCAAAGTT AGAAGAAGCC TAAGTAAGAG CTTTGAGAAT GTGAAGATAT ATCTTGCATA TATACCCACT TATCCAAGCG GGATGTGGAG TTTTGTTATG GCGAGTGATG AAGAAATAAA ACTTAGAAGG CCTTTGAATT TTAAAACGAG ATATTTCAAT GAAGAGATTT ATCATTCATC CATGATTCTT CCAAATTTCA TACAAGAAGA ATGCAAGAAA TACTAA
|
Protein sequence | MELWYSEMHT KNIKIGFRIK EEIGHVHSDY QDIHLFDTYD YGKLLVIDGT VQMTERDEFI YHEMIVHPPL LTHRNPRKIL IIGGGDGGAA REVLKHDVDE VHLVEIDEEV VKIARKHLPS VASSYENPKL HLHIENGIEF VKKNKNFDVI IIDSTDPVGP AEGLFTEEFY MNVKKSLADG GIISQQCGTP FYHPEEVCKV RRSLSKSFEN VKIYLAYIPT YPSGMWSFVM ASDEEIKLRR PLNFKTRYFN EEIYHSSMIL PNFIQEECKK Y
|
| |