Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aazo_4539 |
Symbol | |
ID | 9342344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | 'Nostoc azollae' 0708 |
Kingdom | Bacteria |
Replicon accession | NC_014248 |
Strand | - |
Start bp | 4628120 |
End bp | 4629532 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003722928 |
Protein GI | 298492751 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.470079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAC AGCGAGCGCT ATTAGCGTTA ATTATAGTTT TGGTAATCGC CGCTATTACG GTGATTGCGA CAATTCCTGT ACCCTTAGGA CTGGACTTAC GGGGAGGCTC ACAGCTTACA ATTCAGGTGA AACCAAGCGA GGAAATTAAG GAAATTACCG AACGCGAATT GGAAGCCGTG AAAAAAGTCG TCGAAGGTCG TATTAACGGT CTAGGCGTTT CTGAACCAGT GATTCAAACA GTCGGTACTG ATAAAATTTT AGTGCAGTTG CCTGGAGTCA ATGATCCACA ACAGGCAGAA CGGGTACTAG GTGGTACAGC CCAGTTAGAA TTTCGGACTC AAAAACCAAA TACAGAGACT CAAATATTTG CGCTACAAGT ATCACGAAAA GAACTAAAAG CCAAACAAGA AGAGTTGAGA AAGAGCAACG ATAAAGAAGC GATCGCCAAA AATAAAGAAG AGTTGCAGAA CAATAACCGA GCGATCACCG AATTATTTGA AAGCACCAAC CCACCACTCA CAGGTAAATA CCTCAAAGAT GCCTATGGTG AACCCACCCA AGGTACTAAC TGGAATGTAG CCATCCGCTT CGATCCTAAA GGTGGTGAAC TATTTGCTGA CTTAACAAAA AAGTTAGCAG GAACAGGTCG CACCATCGGT ATTTTTCTAG ACAAAGAATT AATTAGTTCT CCCACCGTAG GAGTAGAATT TGCTTCCACT GGAATAACAG GCGGTTCTGC AGTAATTACA GGACGCCTTG AAGCAGAAGA AGCTAACAAC TTAGGTGTAC AATTAAGAGG TGGTGCCTTA CCCGTACCTG TAGAAATCGC TGAAAGAAGA ACAGTGGGCG CAACCTTGGG TAAAGACAGT ATTCAAAGCA GCATTTACGC CGGTATCGGT GGTCTAATTT TAGTATTGAT ATTCATGGTA GTCTACTATA GACTACCAGG CCTTATTGCT GATGTATCAC TAGTGATATA CTCCCTTTTA AGCTGGGCTA CATTTTGCTT ATTGGGTGTC ACCCTCACCT TGCCAGGAAT TGCTGGTTTT ATTCTCAGTA TTGGAATGGC TGTAGATGCC AACGTACTAA TTTTTGAACG AACGAGGGAA GAATTGCGAG CAGGTAAATC ATTATATCGT TCTGTAGAAT CTGGTTTTTA CCGGGCATTT TCCAGTATTT TAGATAGTAA TGTTACTACC TGGATAGCTT GTGCCGCCCT ATTTTGGTTA GGTTCTGGTT TAGTCAAAGG CTTTGCCCTC ACCTTAGCTT TAGGAGTTGG TGTCAGTATG TTTACAGCCA TCACCTGTAG TCGTACCTTG ATGTTTTTAG CTGTTTCCAT TCCCTCTTGG CGGAAAACAG AACTCTACTG TCCCAAACTG CCAGCATCAA ATAAGGCTAA GGTGGCTCAA TGA
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Protein sequence | MQRQRALLAL IIVLVIAAIT VIATIPVPLG LDLRGGSQLT IQVKPSEEIK EITERELEAV KKVVEGRING LGVSEPVIQT VGTDKILVQL PGVNDPQQAE RVLGGTAQLE FRTQKPNTET QIFALQVSRK ELKAKQEELR KSNDKEAIAK NKEELQNNNR AITELFESTN PPLTGKYLKD AYGEPTQGTN WNVAIRFDPK GGELFADLTK KLAGTGRTIG IFLDKELISS PTVGVEFAST GITGGSAVIT GRLEAEEANN LGVQLRGGAL PVPVEIAERR TVGATLGKDS IQSSIYAGIG GLILVLIFMV VYYRLPGLIA DVSLVIYSLL SWATFCLLGV TLTLPGIAGF ILSIGMAVDA NVLIFERTRE ELRAGKSLYR SVESGFYRAF SSILDSNVTT WIACAALFWL GSGLVKGFAL TLALGVGVSM FTAITCSRTL MFLAVSIPSW RKTELYCPKL PASNKAKVAQ
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