Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aazo_1480 |
Symbol | |
ID | 9339272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | 'Nostoc azollae' 0708 |
Kingdom | Bacteria |
Replicon accession | NC_014248 |
Strand | + |
Start bp | 1550512 |
End bp | 1551495 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | RpoD subfamily RNA polymerase sigma 70 subunit |
Protein accession | YP_003720816 |
Protein GI | 298490639 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000452918 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTACTG TTAACACGCA AACTGAAAAC CTGAATACCA AATTCACGGC TGATATGGTG CGAACCTATC TGCGAGAAAT TGGTCGTGTA CCACTGCTAA CCCGTGAACA AGAGATTGTG TATGGGAAGC AAGTGCAGCA AATGATGACG CTGCTGGACG CTAAAGAAGT TTTGGCAAAA AAACTAGACC ATGAACCTAG TTTACCAGAA TGGGCTGCCC ATGTTAACCA ATCGGAAACC GAAGTTAAGC AGACGGTAGC ACAAGGTAAG CGAGCCAAGC AGAAAATGAT TGAAGCGAAT TTGCGCTTGG TTGTAGCTAT TGCTAAAAAG TATCAAAAGC GAAATATGGA ATTTCTGGAT TTAATCCAGG AAGGAACTTT GGGATTAGAA AGAGGTGTGG AGAAATTTGA TCCCATGCGG GGTTATAAGT TCTCGACCTA TGCTTACTGG TGGATTCGTC AAGCGATTAC GAGAGCGATC GCCCAACAAG GTCGAACCAT CCGCTTACCC ATCCATATTA CCGAAAAGCT GAACAAAATT AAAAAAGTGC AACGTGAGTT GGCGCAAAAG TTGGGAAGGT CTCCTTCACC TACAGAAATC GCCAAAGAAC TAGAATTAGA ACCTGCTCAG ATTCGTGAAT ATCTGAACAT GGCGCGTCAA CCAGTATCTT TAGATGTGCG AGTTGGTGAT AATCAAGATA CCGAACTCCA AGAAATGCTG GAAGATGAAG GGCCATCACC AGAGTATTAC ACAACTCAGG AATTCTTGCG CCAAGACTTG AATAACCTGT TAGCAGAACT AACACCCCAA CAGCGTGAAG TTTTAGCATT GCGCTTTGGA TTAGAAGATG GTAATGAAAT GTCCTTAGCG AAAGTTGGTG AACGCTTAAA CCTCAGCCGT GAGCGAGTCC GTCAACTGGA GCATCAAGCT CTTGCTCATT TACGTCGCCG TCGCGCCAAT GTTAAAGAAT ACGTTGCCAG CTAA
|
Protein sequence | MPTVNTQTEN LNTKFTADMV RTYLREIGRV PLLTREQEIV YGKQVQQMMT LLDAKEVLAK KLDHEPSLPE WAAHVNQSET EVKQTVAQGK RAKQKMIEAN LRLVVAIAKK YQKRNMEFLD LIQEGTLGLE RGVEKFDPMR GYKFSTYAYW WIRQAITRAI AQQGRTIRLP IHITEKLNKI KKVQRELAQK LGRSPSPTEI AKELELEPAQ IREYLNMARQ PVSLDVRVGD NQDTELQEML EDEGPSPEYY TTQEFLRQDL NNLLAELTPQ QREVLALRFG LEDGNEMSLA KVGERLNLSR ERVRQLEHQA LAHLRRRRAN VKEYVAS
|
| |